Inventory of oceanic fauna data including species, weight, and measurements from R/V Point Sur (Cruise DP05) in the Gulf of Mexico from 2017-05-01 to 2017-05-11

Deep-Pelagic Nekton Dynamics of the Gulf of Mexico (DEEPEND)

DOI:
10.7266/N7902234
 
UDI:
R4.x257.226:0005
Last Update:
Jun 27 2018 20:44 UTC
 
Dataset Author(s):
April Cook and Tracey Sutton
Point of Contact:
Cook, April
Nova Southeastern University / Halmos College of Natural Sciences and Oceanography
3301 College Ave
Fort Lauderdale, Florida  33314
USA
acook1@nova.edu
Funding Source:
RFP-IV
Data Collection Period:
2017-05-01 to 2017-05-11

Identified Submitted In-Review Available
3 3 3 3

Suggested Citation:

April Cook and Tracey Sutton. 2018. Inventory of oceanic fauna data including species, weight, and measurements from R/V Point Sur (Cruise DP05) in the Gulf of Mexico from 2017-05-01 to 2017-05-11. Distributed by: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC), Harte Research Institute, Texas A&M University–Corpus Christi. doi:10.7266/N7902234

Abstract:

This dataset includes an inventory of Gulf of Mexico oceanic fauna data including species, weight, and measurements collected from R/V Point Sur (Cruise DP05) from 2017-05-01 to 2017-05-11. The main gear type used was a 10-m2 Multiple Opening Closing Net and Environmental Sensing System (MOCNESS). The MOCNESS was fitted with 6 nets which were opened according to the following depth scheme: net 0 from the surface to 1500m, net 1 from 1500-1200m, net 2 from 200-1000m, net 3 from 1000-600m, net 4 from 600-200m, and net 5 from 200m to the surface. Two trawls were conducted at each station sampled to capture diel vertical migration information; one during daylight hours between 9am-2:30pm CDT, and the other at 9pm-2:30am CDT. A table of the taxonomic hierarchy used in the nekton database is included with references to those scientific names recently updated which are not yet reflected by the Integrated Taxonomic Information System (www.itis.gov). The MOCNESS sensor data and ship data collected during cruise DP05 are available in GRIIDC datasets R4.x257.226:0009 and R4.x257.226:0014 respectively.

Purpose:

Inventory of biological and environmental data to capture diel vertical migration information.

Theme Keywords:

taxonomy, mesopelagic, nekton, trawl, MOCNESS, Multiple Opening Closing Net and Environmental Sensing System

File Format:

xlsx

Filename:

DP05_fauna_inventory.zip (591.19 KB)

Dataset Downloads:

22

Inventory of oceanic fauna data including species, weight, and measurements from R/V Point Sur (Cruise DP05) in the Gulf of Mexico from 2017-05-01 to 2017-05-11



Identification Information
Distribution Information
Metadata Maintenance Information

Metadata: 
  File identifier: 
      R4.x257.226-0005-metadata.xml
  Language: 
      eng; USA
  Character set: 
    Character set code: 
      utf8
  Hierarchy level: 
    Scope code: 
      dataset
  Metadata author: 
    Responsible party: 
      Individual name: 
          Matthew Johnston
      Organisation name: 
          Nova Southeastern University / Halmos College of Natural Sciences and Oceanography
      Position name: 
          Research Scientist
      Contact info: 
        Contact: 
          Phone: 
            Telephone: 
              Voice: 
                  9542623641
              Facsimile: 
          Address: 
            Address: 
              Delivery point: 
                  3301 College Ave
              City: 
                  Fort Lauderdale
              Administrative area: 
                  Florida
              Postal code: 
                  33314
              Country: 
                  USA
              Electronic mail address: 
                  johnmatt@nova.edu
      Role: 
        Role code: 
          pointOfContact
  Date stamp: 
      2018-08-11T13:53:45+00:00
  Metadata standard name: 
      ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
  Metadata standard version: 
      ISO 19115-2:2009(E)
  Dataset URI: 
      https://data.gulfresearchinitiative.org/metadata/R4.x257.226:0005
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Identification info: Data identification: Citation: Citation: Title: Inventory of oceanic fauna data including species, weight, and measurements from R/V Point Sur (Cruise DP05) in the Gulf of Mexico from 2017-05-01 to 2017-05-11 Alternate title: Date: Date: Date: 2018-06-29 Date type: Date type code: publication Identifier: Identifier: Code: Anchor: xlink: https://dx.doi.org/10.7266/N7902234 title: DOI doi:10.7266/N7902234 Abstract: This dataset includes an inventory of Gulf of Mexico oceanic fauna data including species, weight, and measurements collected from R/V Point Sur (Cruise DP05) from 2017-05-01 to 2017-05-11. The main gear type used was a 10-m2 Multiple Opening Closing Net and Environmental Sensing System (MOCNESS). The MOCNESS was fitted with 6 nets which were opened according to the following depth scheme: net 0 from the surface to 1500m, net 1 from 1500-1200m, net 2 from 200-1000m, net 3 from 1000-600m, net 4 from 600-200m, and net 5 from 200m to the surface. Two trawls were conducted at each station sampled to capture diel vertical migration information; one during daylight hours between 9am-2:30pm CDT, and the other at 9pm-2:30am CDT. A table of the taxonomic hierarchy used in the nekton database is included with references to those scientific names recently updated which are not yet reflected by the Integrated Taxonomic Information System (www.itis.gov). The MOCNESS sensor data and ship data collected during cruise DP05 are available in GRIIDC datasets R4.x257.226:0009 and R4.x257.226:0014 respectively. Purpose: Inventory of biological and environmental data to capture diel vertical migration information. Status: Progress code: completed Point of contact: Responsible party: Individual name: April Cook Organisation name: Nova Southeastern University / Halmos College of Natural Sciences and Oceanography Position name: Project Manager Contact info: Contact: Phone: Telephone: Voice: 9542623733 Facsimile: Address: Address: Delivery point: 3301 College Ave City: Fort Lauderdale Administrative area: Florida Postal code: 33314 Country: USA Electronic mail address: acook1@nova.edu Role: Role code: pointOfContact Descriptive keywords: Keywords: Keyword: taxonomy Keyword: mesopelagic Keyword: nekton Keyword: trawl Keyword: MOCNESS Keyword: Multiple Opening Closing Net and Environmental Sensing System Type: Keyword type code: theme Descriptive keywords: Keywords: Keyword: Gulf of Mexico Type: Keyword type code: place Resource constraints: title: Cite As Constraints: Use limitation: April Cook and Tracey Sutton. 2018. Inventory of oceanic fauna data including species, weight, and measurements from R/V Point Sur (Cruise DP05) in the Gulf of Mexico from 2017-05-01 to 2017-05-11. Distributed by: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC), Harte Research Institute, Texas A&M University–Corpus Christi. doi:10.7266/N7902234 Resource constraints: title: CC0 License Legal constraints: Use constraints: Restriction code: licenceUnrestricted Other constraints: This information is released under the Creative Commons license - No Rights Reserved - CC0 1.0 Universal (https://creativecommons.org/publicdomain/zero/1.0/). The person who associated a work with this deed has dedicated the work to the public domain by waiving all of his or her rights to the work worldwide under copyright law, including all related and neighboring rights, to the extent allowed by law. You can copy, modify, distribute and perform the work, even for commercial purposes, all without asking permission. Resource constraints: title: Liability and Warranty Legal constraints: Other constraints: All materials on this website are made available to GRIIDC and in turn to you "as-is." Content may only be submitted by an individual who represents and warrants that s/he has sufficient rights to be able to make the content available under a CC0 waiver. There is no warranty (expressed or implied) to these materials, their title, accuracy, non-infringement of third party rights, or fitness for any particular purpose, including the performance or results you may obtain from their use. Use these materials at your own risk. Under no circumstances shall GRIIDC be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use or the inability to use either this website or the materials available via this website. If you are dissatisfied with any website feature, content, or terms of use, your sole and exclusive remedy is to discontinue use. Aggregation Info: AggregateInformation: Aggregate Data Set Name: title: Related Publication Citation Citation: Title: Kupchik, M. J., Benfield, M. C., & Sutton, T. T. (2018). The First In Situ Encounter of Gigantura chuni (Giganturidae: Giganturoidei: Aulopiformes: Cyclosquamata: Teleostei), with a Preliminary Investigation of Pair-Bonding. Copeia, 106(4), 641–645. doi:10.1643/ce-18-034 Date: inapplicable Aggregate Data Set Identifier: title: Related Publication DOI Identifier: Code: Anchor: xlink: https://dx.doi.org/10.1643/ce-18-034 title: DOI doi:10.1643/ce-18-034 Association Type: Association type code: crossReference Aggregation Info: AggregateInformation: Aggregate Data Set Name: title: Related Publication Citation Citation: Title: Moore, J. A., Fenolio, D. B., Cook, A. B., & Sutton, T. T. (2020). Hiding in Plain Sight: Elopomorph Larvae Are Important Contributors to Fish Biodiversity in a Low-Latitude Oceanic Ecosystem. Frontiers in Marine Science, 7. doi:10.3389/fmars.2020.00169 Date: inapplicable Aggregate Data Set Identifier: title: Related Publication DOI Identifier: Code: Anchor: xlink: https://dx.doi.org/10.3389/fmars.2020.00169 title: DOI doi:10.3389/fmars.2020.00169 Association Type: Association type code: crossReference Aggregation Info: AggregateInformation: Aggregate Data Set Name: title: Related Publication Citation Citation: Title: MAPSTONE, G., & YOUNGBLUTH, M. (2020). <p><strong>New observations on the rare physonect <em>Melophysa</em> <em>melo</em> (Siphonophora; Agalmatidae) from the northern Gulf of Mexico</strong></p>. Zootaxa, 4732(1), 117–137. doi:10.11646/zootaxa.4732.1.5 Date: inapplicable Aggregate Data Set Identifier: title: Related Publication DOI Identifier: Code: Anchor: xlink: https://dx.doi.org/10.11646/zootaxa.4732.1.5 title: DOI doi:10.11646/zootaxa.4732.1.5 Association Type: Association type code: crossReference Aggregation Info: AggregateInformation: Aggregate Data Set Name: title: Related Publication Citation Citation: Title: Baker, L. J., Freed, L. L., Easson, C. G., Lopez, J. V., Fenolio, D., Sutton, T. T., … Hendry, T. A. (2019). Diverse deep-sea anglerfishes share a genetically reduced luminous symbiont that is acquired from the environment. eLife, 8. doi:10.7554/elife.47606 Date: inapplicable Aggregate Data Set Identifier: title: Related Publication DOI Identifier: Code: Anchor: xlink: https://dx.doi.org/10.7554/eLife.47606 title: DOI doi:10.7554/eLife.47606 Association Type: Association type code: crossReference Language: eng; USA Topic category: Topic category code: oceans Topic category: Topic category code: biota Extent: Extent: Geographic element: Geographic bounding box: West bound longitude: -88.04833 East bound longitude: -86.93423333 South bound latitude: 27.46351667 North bound latitude: 29.098117 Geographic element: BoundingPolygon: Polygon: gml:MultiCurve: gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.518767 -87.989717 28.6571 -87.92673333 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.5116 -88.015317 28.39965 -87.90975 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.016267 -88.04833 27.98441667 -87.88 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.0442 -88.0383 27.9233 -87.94286667 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 27.531283 -88.023617 27.46351667 -87.87091667 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 27.973967 -87.51 28.1208 -87.44391667 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.117917 -87.389983 28.04675 -87.55595 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 27.994483 -87.003133 28.13208333 -86.93423333 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.002117 -87.002667 28.14191667 -87.08085 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 27.927183 -87.017817 28.0899 -87.03205 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.496817 -87.496883 28.3661 -87.5142 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.473233 -87.4962 28.5847 -87.3861 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 29.031783 -87.49 28.89581667 -87.5789 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.992283 -87.4786 29.03365 -87.64915 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 29.098117 -87.628767 29.03211667 -87.5404 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.969067 -87.439633 29.011 -87.60603333 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 29.02615 -87.987433 28.87025 -88.0446 Temporal element: Temporal extent: Extent: Time period: Description: ground condition Begin date: 2017-05-01 End date: 2017-05-11 Supplemental Information: File “DP05_Trawl_Data.xlsx”: EntryNum (Automatic number uniquely identifies each record); TrawlNo (Unique identifier for each trawl deployment); TrawlNo_NetNo (Unique identifier for use in queries); Cruise_Name (Name of the vessel); Cruise_No (Cruise number); Gear (Sample method; MOC10 = 10 meter MOCNESS Net); StationID (NRDA Station ID); SolarCycle (Day/Night sampling time (D = day (exclusive of twilights) and N = night (exclusive of twilights))); NetNo (Net Number (1m^2 MOCNESS: 0-7)); SampleID (NRDA unique identifier for each sample); SampleDate (Sample date (DDMMMYY) when trawl was deployed); StartLat (Start latitude in decimal degrees); StartLon (Start longitude in decimal degrees); EndLat (End latitude in decimal degrees); EndLon (End longitude in decimal degrees); TowStartTime_CDT (Tow/transect start time in local time (central daylight time)); TowEndTime_CDT (Tow/transect end time in local time (central daylight time)); ElapsedTime (Time elapsed between tow start and end times - Hours:Minutes); MOC10FileName (MOC10 filename (.PRO)); MinDepth (Minimum depth of net sampling (m)); MaxDepth (Maximum depth of net sampling (m)); DepthRange (Depth Range = minimum sampling depth – maximum sampling depth (m)); DepthCode (1: 1500-1200m, 2:1200-1000m, 3:1000-600m, 4:600-200m, 5: 200-0m, 1a:1500-1000m, 1b:1300-1200m, 3a:1000-0m, 3b:800-600m, 3c:900-800m, 3d:1000-800m, 4a: 600-400m, 4b:400-200m, 4c:600-0m, 4d:500-0m, 5a:200-100m, 5b:100-0 m); DepthBin (Represents the depth bin used for analysis when binning samples; 1: 1500-1200m, 2:1200-1000m, 3:1000-600m, 4:600-200m, 5: 200-0m); MaxWaterDepth (Maximum water column depth (m)); MaxDeployDepth (Maximum depth of net during that deployment); DepthUnits (Depth units (m)); Volume (Volume filtered by the net calculated by the MOCNESS software); VolUnits (Volume filtered units (m^3)); Quant_or_Meat (Meat: Incorrect or missing flow data or the net ripped, Non-Standard: Net fished depth ranges other than strict depth bins 1-5, Quantitative: Net fished correct depth strata and has valid flow data, X: Net did not open, no sample collected); NetMeshSize (Net mesh size); NetMeshSizeUnits (Net mesh size units (mm)); SampPres (Sample preservation); Comments (Sample notes); All5NetsQuant (True if nets 1-5 are all quantitative; this column is only used for analysis purposes); File “DP05_Nekton_Database.xlsx”: EntryNumber (Automatic number to uniquely identify entries); SampleID (Unique identifier for each Sample); TaxonomicRank (Taxon level in a taxonomic hierarchy); Lowest_Taxonomic_Identification (Taxonomic identification to the level of 100% confidence); Taxon_Comments (Comments related to the identification of the animal); Counts (Count of individuals in the taxonomic group in the sample); WetWeight_kg (Wet weight (kg) recorded at sea by motion-compensating scale with a 1.0 g resolution (blank values did not register a weight)); PostFormWeight (Weight (g) recorded after being preserved in 10% formalin); PostEthWeight (Weight (g) recorded after being preserved in 70% ethanol); PostIsoWeight (Weight (g) recorded after being preserved in 50% isopropyl); LifeHistory_Stage (Life stage of nekton if known (Larvae; Post-larvae; Transforming Juvenile; Juvenile; Adult)); Sex (Gender); Genetics_YN (Tissue sample or whole animal sampled for genetic barcoding and/or population genetics/connectivity studies); SIA_YN (Whole animal frozen -20 for Dr. David Wells/Travis Richards Stable Isotope studies (TAMUG)); PAH_YN (Whole animal or dissected animal frozen -20 for Dr. Isabel Romero for PAH studies (USF CMS)); CSIA_YN (Tissue sample or whole animal preserved in liquid nitrogen (TAMUG)); Hg_YN (Whole animal frozen -20 for Dr. Chad Hammerschmidt (chad.hammerschmidt@wright.edu) at Wright State University (WSU)); Photo_YN (Photographed by Dante Fenolio at sea); Disposition (Lab or container tracking the sample; Default value=“Bucket” which means it was placed into the sample jar collected in the field and resides at NSU; “DPXXXX” if placed into a separate jar; TAMUG/WSU/FRANK/USFSP/USF designates the lab to which the sample was sent)); Comments (Sample comments); LengthUnits (unit of measure for length (mm)); ST_Length_1 through ST_Length_25 (Length of organism; Squid - mantle length; fish - standard length on most fish, total length for eels; Shrimp - Carapace length); File “Taxon_List_through_DP05_061818.xlsx”: LowestTaxonomicIDStandard (The lowest taxonomic identification made); TaxonomicRank (Taxon level in a taxonomic hierarchy); FunctionalGroup (Groupings according to similar acoustic signatures); Species; Genus; Tribe; Subfamily; Family; Superfamily; Subsection; Section; Infraorder; Suborder; Order; Superorder; Infraclass; Subclass; Class; Superclass; Subphylum; Phylum; Kingdom; Reference; Gelzoop (gelatinous zooplankton)|||||
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Distribution info: Distribution: Distributor: Distributor: Distributor contact: Responsible party: Organisation name: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC) Contact info: Contact: Phone: Telephone: Voice: 3618253604 Address: Address: Delivery point: 6300 Ocean Drive City: Corpus Christi Administrative area: TX Postal code: 78412 Country: USA Electronic mail address: griidc@gomri.org Online Resource: Online Resource: Linkage: URL: https://data.gulfresearchinitiative.org Role: Role code: distributor Distributor format: Format: Name: xlsx Version: inapplicable File decompression technique: zip Distributor transfer options: Digital transfer options: Transfer size: 0.5912 Online: Online Resource: Linkage: URL: https://data.gulfresearchinitiative.org/data/R4.x257.226:0005 Protocol: https Name: Data Landing Page Description: GRIIDC dataset landing page Function: Online function code: information
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Metadata maintenance: Maintenance information: Maintenance and update frequency: unknown Maintenance note: This ISO metadata record was automatically generated from information provided to GRIIDC for dataset: R4.x257.226:0005 on 2020-08-09T07:14:02-05:00
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