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Fish eggs and larvae assemblages collected before and after the Deepwater Horizon oil spill, near Dauphin Island, Alabama, June-July 2007, 2008, 2009, 2010An Examination of Pre- and Post-Spill Ichthyoplankton Assemblage Dynamics
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Suggested Citation:
Frank Hernandez, Keith Bayha. 2015. Fish eggs and larvae assemblages collected before and after the Deepwater Horizon oil spill, near Dauphin Island, Alabama, June-July 2007, 2008, 2009, 2010. Distributed by: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC), Harte Research Institute, Texas A&M University–Corpus Christi. doi:10.7266/N7RN35TR
Abstract:
The goal of this project was to compare fish egg and larvae assemblages before and after the Deepwater Horizon oil spill to quantify potential impacts of the oil spill on these highly vulnerable early life stages. Depth-discrete and surface ichthyoplankton samples collected off coastal Alabama(20m depth) were available from a monitoring program that began in 2004 and continued through 2010. In this study, only samples collected during one month (June or July) coincident with the occurrence of oil at the study location were processed for egg and larvae identification and enumeration. Fish eggs and challenging larvae were identified to species level using DNA barcoding techniques (DNA sequencing of partial cytochrome c oxidase I [COI]). Remaining larvae were identified using described morphometric characters. Species abundances, vertical distributions, and assemblage metrics (e.g., richness, diversity) were compared before and after the oil spill to assess potential impacts of the oil spill on these early life stages of fishes. Ichthyoplankton data are from June and July sampling events in 2007, 2009 and 2010. Fish egg data are from 2007, 2008 and 2010..
Purpose:
These data are a subset of the Fisheries Oceanography of Coastal Alabama (FOCAL) ichthyoplankton survey data relevant to the examination of Deepwater Horizon impacts on larval fish assemblages in the northern Gulf of Mexico. Fish egg identifications are also included to identify 'at risk' taxa spawning during the oil spill period (May-August).
Theme Keywords:
ichthyoplankton, larval fish, fish eggs, neuston, Fisheries Oceanography of Coastal Alabama, FOCAL
File Format:
xlsx
Filename:
GoMRI DISL Block Grant Hernandez.xlsx (919.3 KB)
Dataset Downloads:
18
Fish eggs and larvae assemblages collected before and after the Deepwater Horizon oil spill, near Dauphin Island, Alabama, June-July 2007, 2008, 2009, 2010
Identification Information
Distribution Information
Metadata Maintenance Information
Metadata:
File identifier:
Y1.x005.000-0001-metadata.xml
Language:
eng; USA
Character set:
Character set code:
utf8
Hierarchy level:
Scope code:
dataset
Metadata author:
Responsible party:
Individual name:
Frank Hernandez
Organisation name:
University of Southern Mississippi / Department of Coastal Sciences
Position name:
Assistant Professor
Contact info:
Contact:
Phone:
Telephone:
Voice:
2288188800
Facsimile:
Address:
Address:
Delivery point:
Gulf Coast Research Laboratory
703 East Beach Drive
City:
Ocean Springs
Administrative area:
Mississippi
Postal code:
39564
Country:
USA
Electronic mail address:
frank.hernandez@usm.edu
Role:
Role code:
pointOfContact
Date stamp:
2018-08-11T13:29:18+00:00
Metadata standard name:
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
Metadata standard version:
ISO 19115-2:2009(E)
Dataset URI:
https://data.gulfresearchinitiative.org/metadata/Y1.x005.000:0001
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Identification info:
Data identification:
Citation:
Citation:
Title:
Fish eggs and larvae assemblages collected before and after the Deepwater Horizon oil spill, near Dauphin
Island, Alabama, June-July 2007, 2008, 2009, 2010
Alternate title:
Date:
Date:
Date:
2015-10-14
Date type:
Date type code:
publication
Identifier:
Identifier:
Code:
Anchor: xlink: https://dx.doi.org/doi:10.7266/N7RN35TR title: DOI
doi:10.7266/N7RN35TR
Abstract:
The goal of this project was to compare fish egg and larvae assemblages before and after the Deepwater Horizon
oil spill to quantify potential impacts of the oil spill on these highly vulnerable early life stages.
Depth-discrete and surface ichthyoplankton samples collected off coastal Alabama(20m depth) were available
from a monitoring program that began in 2004 and continued through 2010. In this study, only samples
collected during one month (June or July) coincident with the occurrence of oil at the study location were
processed for egg and larvae identification and enumeration. Fish eggs and challenging larvae were
identified to species level using DNA barcoding techniques (DNA sequencing of partial cytochrome c oxidase I
[COI]). Remaining larvae were identified using described morphometric characters. Species abundances,
vertical distributions, and assemblage metrics (e.g., richness, diversity) were compared before and after
the oil spill to assess potential impacts of the oil spill on these early life stages of fishes.
Ichthyoplankton data are from June and July sampling events in 2007, 2009 and 2010. Fish egg data are from
2007, 2008 and 2010..
Purpose:
These data are a subset of the Fisheries Oceanography of Coastal Alabama (FOCAL) ichthyoplankton survey data
relevant to the examination of Deepwater Horizon impacts on larval fish assemblages in the northern Gulf of
Mexico. Fish egg identifications are also included to identify 'at risk' taxa spawning during the oil spill
period (May-August).
Status:
Progress code:
completed
Point of contact:
Responsible party:
Individual name:
Frank Hernandez
Organisation name:
University of Southern Mississippi / Department of Coastal Sciences
Position name:
Assistant Professor
Contact info:
Contact:
Phone:
Telephone:
Voice:
2288188800
Facsimile:
Address:
Address:
Delivery point:
Gulf Coast Research Laboratory
703 East Beach Drive
City:
Ocean Springs
Administrative area:
Mississippi
Postal code:
39564
Country:
USA
Electronic mail address:
frank.hernandez@usm.edu
Role:
Role code:
pointOfContact
Point of contact:
Responsible party:
Individual name:
Frank Hernandez
Organisation name:
University of Southern Mississippi / Department of Coastal Sciences
Position name:
Assistant Professor
Contact info:
Contact:
Phone:
Telephone:
Voice:
2288188800
Facsimile:
Address:
Address:
Delivery point:
Gulf Coast Research Laboratory
703 East Beach Drive
City:
Ocean Springs
Administrative area:
Mississippi
Postal code:
39564
Country:
USA
Electronic mail address:
frank.hernandez@usm.edu
Role:
Role code:
pointOfContact
Descriptive keywords:
Keywords:
Keyword:
ichthyoplankton
Keyword:
larval fish
Keyword:
fish eggs
Keyword:
neuston
Keyword:
Fisheries Oceanography of Coastal Alabama
Keyword:
FOCAL
Type:
Keyword type code:
theme
Descriptive keywords:
Keywords:
Keyword:
Alabama
Keyword:
Dauphin Island
Keyword:
northern Gulf of Mexico
Type:
Keyword type code:
place
Resource constraints: title: Cite As
Constraints:
Use limitation:
Frank Hernandez, Keith Bayha. 2015. Fish eggs and larvae assemblages collected before and after the
Deepwater Horizon oil spill, near Dauphin Island, Alabama, June-July 2007, 2008, 2009, 2010. Distributed
by: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC), Harte Research
Institute, Texas A&M University–Corpus Christi. doi:10.7266/N7RN35TR
Resource constraints: title: CC0 License
Legal constraints:
Use constraints:
Restriction code:
licenceUnrestricted
Other constraints:
This information is released under the Creative Commons license - No Rights Reserved - CC0 1.0 Universal
(https://creativecommons.org/publicdomain/zero/1.0/). The person who associated a work with this deed
has dedicated the work to the public domain by waiving all of his or her rights to the work worldwide
under copyright law, including all related and neighboring rights, to the extent allowed by law. You can
copy, modify, distribute and perform the work, even for commercial purposes, all without asking
permission.
Resource constraints: title: Liability and Warranty
Legal constraints:
Other constraints:
All materials on this website are made available to GRIIDC and in turn to you "as-is." Content may only be
submitted by an individual who represents and warrants that s/he has sufficient rights to be able to
make the content available under a CC0 waiver. There is no warranty (expressed or implied) to these
materials, their title, accuracy, non-infringement of third party rights, or fitness for any particular
purpose, including the performance or results you may obtain from their use. Use these materials at your
own risk. Under no circumstances shall GRIIDC be liable for any direct, incidental, special,
consequential, indirect, or punitive damages that result from the use or the inability to use either
this website or the materials available via this website. If you are dissatisfied with any website
feature, content, or terms of use, your sole and exclusive remedy is to discontinue use.
Language:
eng; USA
Topic category:
Topic category code:
oceans
Topic category:
Topic category code:
biota
Topic category:
Topic category code:
environment
Extent:
Extent:
Geographic element:
Geographic bounding box:
West bound longitude:
-88.2116
East bound longitude:
-88.2116
South bound latitude:
30.0902
North bound latitude:
30.0902
Geographic element:
BoundingPolygon:
Polygon:
Point:
gml:pos:
30.0902 -88.2116
Temporal element:
Temporal extent:
Extent:
Time period:
Description:
ground condition
Begin date:
2007-06-01
End date:
2010-08-05
Supplemental Information:
1. MININESS_Fish_eggs Contains fish egg counts and densities from MININESS tows Date Sampling date cruise
Cruise ID (ship-month-year) station Sampling station mininess_id Unique ID given to entire MININESS tow net
Individual net (nested within MININESS ID) mesh Mesh size in microns depth_bin Depth bin that the given net
sampled preserve Chemical preservative used sampleid Unique ID given to the preserved contents of a single
net comment Comments from the field sampling total_swept_volume Volume of water passed through the net (from
flow meter) total_distance Distance net was towed (from flow meter) total_time_open Total time the net was
deployed and actively sampling Eggs Number of fish eggs counted in the subsample Eggs Aliquot Fraction of
sample used to count eggs (1=entire sample; 0.5=half sample) Remarks Comments from the laboratory processing
of samples Total fish eggs Total fish eggs in the whole sample (calculated from egg count and aliquot, and
then multipled by two because sample was split prior to counting) Egg density (no/m3) Total fish eggs
divided by total swept volume Depth_max Maximum depth the net was towed for oblique tows only Areal egg
density (no/m2) Areal density calculated for oblique tows only (count*(depth max/total swept volume)) 2.
MININESS_5mm-_Fish Contains larval fish (less than 5mm) counts and densities from MININESS tows Date
Sampling date cruise Cruise ID (ship-month-year) station Sampling station mininess_id Unique ID given to
entire MININESS tow net Individual net (nested within MININESS ID) mesh Mesh size in microns depth_bin Depth
bin that the given net sampled preserve Chemical preservative used dbo_mininess_header.comment Comments from
the field sampling sampleid Unique ID given to the preserved contents of a single net total_swept_volume
Volume of water passed through the net (from flow meter) total_distance Distance net was towed (from flow
meter) total_time_open Total time the net was deployed and actively sampling Order_field Order-level fish ID
Family Family-level fish ID Taxon Lowest-taxonomic-level fish ID dbo_ichthyoplankton_revised.comment
Comments from the laboratory processing of samples Aliquot Fraction of sample used to count and ID larval
fish (1=entire sample; 0.5=half sample) Measured Number of larval fish measured Not_Measured Number of
larval fish not measured Total Total number of larval fish counted in the subsample Corrected_total Total
fish larvae in the whole sample (calculated from fish count and aliquot, and then multipled by two because
sample was split prior to counting) Density_fish_100m-3 Total fish larvae divided by total swept volume
(then multiplied by 100) Depth_max Maximum depth the net was towed for oblique tows only
Areal_density(fish/10m2) Areal density calculated for oblique tows only (count*(depth max/total swept
volume)*10) 3. MININESS_5mm+_Fish Contains fish (greater than 5mm) counts and densities from MININESS tows
Date Sampling date cruise Cruise ID (ship-month-year) station Sampling station mininess_id Unique ID given
to entire MININESS tow net Individual net (nested within MININESS ID) mesh Mesh size in microns depth_bin
Depth bin that the given net sampled preserve Chemical preservative used sampleid Unique ID given to the
preserved contents of a single net dbo_mininess_header.comment Comments from the field sampling
total_swept_volume Volume of water passed through the net (from flow meter)total_distance Distance net was
towed (from flow meter) total_time_open Total time the net was deployed and actively sampling Order_field
Order-level fish ID Family Family-level fish ID Taxon Lowest-taxonomic-level fish ID
dbo_ichthyoplankton_5mm_header.comment Comments from the laboratory processing of samples Measured Number of
fish measured Not_Measured Number of fish not measured Total Total number of fish counted in the subsample
(no aliquots are used for greater than 5mm, all fish are counted) Density_fish_100m-3 Total fish divided by
total swept volume (then multiplied by 100) Depth_max Maximum depth the net was towed for oblique tows only
Areal_density(fish/10m2) Areal density calculated for oblique tows only (count*(depth max/total swept
volume)*10) 4. MININESS_5mm-_Fish_lengths Contains larval fish (less than 5mm) counts and body lengths from
MININESS tows Date Sampling date cruise Cruise ID (ship-month-year) station Sampling station mininess_id
Unique ID given to entire MININESS tow net Individual net (nested within MININESS ID) mesh Mesh size in
microns depth_bin Depth bin that the given net sampled preserve Chemical preservative used sampleid Unique
ID given to the preserved contents of a single net dbo_mininess_header.comment Comments from the field
sampling Taxon Lowest-taxonomic-level fish ID dbo_ichthyoplankton_revised.comment Comments from the
laboratory processing of samples Aliquot Fraction of sample used to count and ID larval fish (1=entire
sample; 0.5=half sample) Measured Number of larval fish measured Not_Measured Number of larval fish not
measured Total Total number of larval fish counted in the subsample Corrected_total Total fish larvae in the
whole sample (calculated from fish count and aliquot, and then multipled by two because sample was split
prior to counting) L[number] Notochord/standard length in mm of fish [number] 5. MININESS_5mm+_Fish_lengths
Contains fish (greater than 5mm) counts and body lengths from MININESS tows Date Sampling date cruise Cruise
ID (ship-month-year) station Sampling station mininess_id Unique ID given to entire MININESS tow net
Individual net (nested within MININESS ID) mesh Mesh size in microns depth_bin Depth bin that the given net
sampled preserve Chemical preservative used sampleid Unique ID given to the preserved contents of a single
net dbo_mininess_header.comment Comments from the field sampling order_field Order-level fish ID family
Family-level fish ID Taxon Lowest-taxonomic-level fish ID dbo_ichthyoplankton_5mm_header.comment Comments
from the laboratory processing of samples Measured Number of fish measured Not_Measured Number of fish not
measured Total Total number of fish counted in the sample (greater than 5mm fish are not subsampled) length
Notochord/standard length in mm of fish (each fish is listed in a separate row) 6. Neuston_Fish_eggs
Contains fish egg counts and densities from Neuston tows Date Sampling date cruise Cruise ID
(ship-month-year) station Sampling station gear Sampling gear used to collect eggs, in this case a Neuston
net mesh Mesh size in microns time_start Time (hhmm) that the tow started time_end Time (hhmm) that the tow
ended flow_start Flow meter reading at start of the tow flow_end Flow meter reading at the end of the tow
sampleid Unique ID given to the preserved contents of a single net preserve Chemical preservative used
comment Comments from the field sampling Eggs Number of fish eggs counted in the subsample Eggs Aliquot
Fraction of sample used to count fish eggs (1=entire sample; 0.5=half sample) Remarks comments from the
laboratory processing of samples Total fish eggs Total fish eggs in the whole sample (calculated from egg
count and aliquot, and then multipled by two because sample was split prior to counting) 7.
Neuston_5mm-_Fish Contains larval fish (less than 5mm) counts from Neuston tows Date Sampling date cruise
Cruise ID (ship-month-year) station Sampling station time_start Time (hhmm) that the tow started time_end
Time (hhmm) that the tow ended flow_start Flow meter reading at start of the tow flow_end Flow meter reading
at the end of the tow preserve Chemical preservative used mesh Mesh size in microns sampleid Unique ID given
to the preserved contents of a single net dbo_neuston_ring.comment Comments from the field sampling
Order_field Order-level fish ID Family Family-level fish ID Taxon Lowest-taxonomic-level fish ID
dbo_ichthyoplankton_revised.comment Comments from the laboratory processing of samples Measured Number of
larval fish measured Not_Measured Number of larval fish not measured Total Total number of larval fish
counted in the subsample Aliquot Fraction of sample used to count and ID larval fish (1=entire sample;
0.5=half sample) Corrected_total Total fish larvae in the whole sample (calculated from fish count and
aliquot, and then multipled by two because sample was split prior to counting) 8. Neuston_5mm+_Fish Contains
fish (greater than 5mm) counts from Neuston tows Date Sampling date cruise Cruise ID (ship-month-year)
station Sampling station time_start Time (hhmm) that the tow started time_end Time (hhmm) that the tow ended
flow_start Flow meter reading at start of the tow flow_end Flow meter reading at the end of the tow preserve
Chemical preservative used mesh Mesh size in microns sampleid Unique ID given to the preserved contents of a
single net dbo_neuston_ring.comment Comments from the field sampling order_field Order-level fish ID family
Family-level fish ID Taxon Lowest-taxonomic-level fish ID dbo_ichthyoplankton_5mm_header.comment Comments
from the laboratory processing of samples Measured Number of fish measured Not_Measured Number of fish not
measured Total Total number of fish counted in the sample (greater than 5mm fish are not subsampled; i.e.,
all are counted) 9. Neuston_5mm-_Fish_lengths Contains larval fish (less than 5mm) counts and body lengths
from Neuston tows date Sampling date cruise Cruise ID (ship-month-year) station Sampling station gear
Sampling gear used to collect eggs, in this case a Neuston net mesh Mesh size in microns time_start Time
(hhmm) that the tow started time_end Time (hhmm) that the tow ended flow_start Flow meter reading at start
of the tow flow_end Flow meter reading at the end of the tow sampleid Unique ID given to the preserved
contents of a single net preserve Chemical preservative used dbo_neuston_ring_comment Comments from the
field sampling taxon Lowest-taxonomic-le
⋮
number, Date, Filtered Volume (m^3), Total number of eggs in Sample, Number of Eggs Barcoded. |||||
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Distribution info:
Distribution:
Distributor:
Distributor:
Distributor contact:
Responsible party:
Organisation name:
Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC)
Contact info:
Contact:
Phone:
Telephone:
Voice:
3618253604
Address:
Address:
Delivery point:
6300 Ocean Drive
City:
Corpus Christi
Administrative area:
TX
Postal code:
78412
Country:
USA
Electronic mail address:
griidc@gomri.org
Online Resource:
Online Resource:
Linkage:
URL:
https://data.gulfresearchinitiative.org
Role:
Role code:
distributor
Distributor format:
Format:
Name:
xlsx
Version:
inapplicable
File decompression technique:
Distributor transfer options:
Digital transfer options:
Transfer size:
0.9193
Online:
Online Resource:
Linkage:
URL:
https://data.gulfresearchinitiative.org/data/Y1.x005.000:0001
Protocol:
https
Name:
Data Landing Page
Description:
GRIIDC dataset landing page
Function:
Online function code:
information
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Metadata maintenance:
Maintenance information:
Maintenance and update frequency:
unknown
Maintenance note:
This ISO metadata record was automatically generated from information provided to GRIIDC for dataset:
Y1.x005.000:0001 on 2020-05-30T13:24:54-05:00
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