Hepatic polycyclic aromatic hydrocarbons (PAHs) in Gulf and Southern Hake collected aboard multiple R/V Weatherbird II cruises in the Gulf of Mexico from 2012-08-21 to 2015-09-24

Center for the Integrated Modeling and Analysis of Gulf Ecosystems III (C-IMAGE III)

DOI:
10.7266/n7-tv8b-7h23
 
UDI:
R6.x805.000:0071
Last Update:
Apr 08 2019 14:27 UTC
 
Dataset Author(s):
Erin Pulster, Steven Murawski, Rachel Struch
Point of Contact:
Pulster, Erin
University of South Florida / College of Marine Science
140 7th Ave South
St. Petersburg, Florida  33701
USA
epulster@mail.usf.edu
Funding Source:
RFP-VI
Data Collection Period:
2012-08-21 to 2015-09-24

Identified Submitted In-Review Available
3 3 3 3

Suggested Citation:

Erin Pulster, Steven Murawski, Rachel Struch. 2019. Hepatic polycyclic aromatic hydrocarbons (PAHs) in Gulf and Southern Hake collected aboard multiple R/V Weatherbird II cruises in the Gulf of Mexico from 2012-08-21 to 2015-09-24. Distributed by: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC), Harte Research Institute, Texas A&M University–Corpus Christi. doi:10.7266/n7-tv8b-7h23

Abstract:

This dataset contains hepatic polycyclic aromatic hydrocarbons (PAHs) in Gulf and Southern Hake collected aboard multiple R/V Weatherbird II cruises in the Gulf of Mexico from 2012-08-21 to 2015-09-24. PAH was extracted from liver samples using a modified QuEChERS (Bond Elut, Agilent Technologies, Santa Clara, CA, USA) method optimized specifically for these study species. Extracts were analyzed using Agilent’s 7890B gas chromatograph (GC) coupled to a 7010 tandem mass spectrometer (MS/MS) operating in multiple reactions mode (MRM). The dataset contains the location, date, biometrics, and the total concentration of polycyclic aromatic hydrocarbon (PAHs) in livers. The cruise documentation was provided for the R/V Weatherbird II cruises WB1304 (2012-08-13 to 2012-08-25), WB1403 (2013-08-15 to 2013-08-30), WB1502 (2014-08-05 to 2014-08-20), WB1602 (2015-08-15 to 2015-08-30), and WB1603 (2015-09-10 to 2015-10-02), led by chief scientists Dr. Steven Murawski and Dr. David Hollander.

Purpose:

Data were collected to characterize the impacts of the Deepwater Horizon oil spill on benthic species.

Theme Keywords:

Deepwater Horizon, oil spill, polycyclic aromatic hydrocarbons, fish, Urophycis

File Format:

xlsx

Filename:

Struch-R6.805.000-0071.zip (159.13 KB)

Dataset Downloads:

3

Hepatic polycyclic aromatic hydrocarbons (PAHs) in Gulf and Southern Hake collected aboard multiple R/V Weatherbird II cruises in the Gulf of Mexico from 2012-08-21 to 2015-09-24



Identification Information
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Metadata: 
  File identifier: 
      R6.x805.000-0071-metadata.xml
  Language: 
      eng; USA
  Character set: 
    Character set code: 
      utf8
  Hierarchy level: 
    Scope code: 
      dataset
  Metadata author: 
    Responsible party: 
      Individual name: 
          Carla Fotherby
      Organisation name: 
          University of South Florida
      Position name: 
          Collections Specialist
      Contact info: 
        Contact: 
          Phone: 
            Telephone: 
              Voice: 
                  8139746220
              Facsimile: 
          Address: 
            Address: 
              Delivery point: 
                  4202 E. Fowler Ave.
              City: 
                  Tampa
              Administrative area: 
                  Florida
              Postal code: 
                  33620
              Country: 
                  USA
              Electronic mail address: 
                  cfotherby@usf.edu
      Role: 
        Role code: 
          pointOfContact
  Date stamp: 
      2019-09-27T15:55:47+00:00
  Metadata standard name: 
      ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
  Metadata standard version: 
      ISO 19115-2:2009(E)
  Dataset URI: 
      https://data.gulfresearchinitiative.org/metadata/R6.x805.000:0071
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Identification info: Data identification: Citation: Citation: Title: Hepatic polycyclic aromatic hydrocarbons (PAHs) in Gulf and Southern Hake collected aboard multiple R/V Weatherbird II cruises in the Gulf of Mexico from 2012-08-21 to 2015-09-24 Alternate title: Date: Date: Date: 2019-09-25 Date type: Date type code: publication Identifier: Identifier: Code: Anchor: xlink: https://dx.doi.org/10.7266/n7-tv8b-7h23 title: DOI doi:10.7266/n7-tv8b-7h23 Abstract: This dataset contains hepatic polycyclic aromatic hydrocarbons (PAHs) in Gulf and Southern Hake collected aboard multiple R/V Weatherbird II cruises in the Gulf of Mexico from 2012-08-21 to 2015-09-24. PAH was extracted from liver samples using a modified QuEChERS (Bond Elut, Agilent Technologies, Santa Clara, CA, USA) method optimized specifically for these study species. Extracts were analyzed using Agilent’s 7890B gas chromatograph (GC) coupled to a 7010 tandem mass spectrometer (MS/MS) operating in multiple reactions mode (MRM). The dataset contains the location, date, biometrics, and the total concentration of polycyclic aromatic hydrocarbon (PAHs) in livers. The cruise documentation was provided for the R/V Weatherbird II cruises WB1304 (2012-08-13 to 2012-08-25), WB1403 (2013-08-15 to 2013-08-30), WB1502 (2014-08-05 to 2014-08-20), WB1602 (2015-08-15 to 2015-08-30), and WB1603 (2015-09-10 to 2015-10-02), led by chief scientists Dr. Steven Murawski and Dr. David Hollander. Purpose: Data were collected to characterize the impacts of the Deepwater Horizon oil spill on benthic species. Status: Progress code: completed Point of contact: Responsible party: Individual name: Erin Pulster Organisation name: University of South Florida / College of Marine Science Position name: Research Scientist Contact info: Contact: Phone: Telephone: Voice: 9413884441 Facsimile: Address: Address: Delivery point: 140 7th Ave South City: St. Petersburg Administrative area: Florida Postal code: 33701 Country: USA Electronic mail address: epulster@mail.usf.edu Role: Role code: pointOfContact Point of contact: Responsible party: Individual name: Steven A Murawski Organisation name: University of South Florida / College of Marine Science Position name: Professor Contact info: Contact: Phone: Telephone: Voice: 7275533367 Facsimile: Address: Address: Delivery point: 140 7th Ave South City: St. Petersburg Administrative area: Florida Postal code: 33701 Country: USA Electronic mail address: smurawski@usf.edu Role: Role code: pointOfContact Descriptive keywords: Keywords: Keyword: Deepwater Horizon Keyword: oil spill Keyword: polycyclic aromatic hydrocarbons Keyword: fish Keyword: Urophycis Type: Keyword type code: theme Descriptive keywords: Keywords: Keyword: Gulf of Mexico Type: Keyword type code: place Resource constraints: title: Cite As Constraints: Use limitation: Erin Pulster, Steven Murawski, Rachel Struch. 2019. Hepatic polycyclic aromatic hydrocarbons (PAHs) in Gulf and Southern Hake collected aboard multiple R/V Weatherbird II cruises in the Gulf of Mexico from 2012-08-21 to 2015-09-24. Distributed by: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC), Harte Research Institute, Texas A&M University–Corpus Christi. doi:10.7266/n7-tv8b-7h23 Resource constraints: title: CC0 License Legal constraints: Use constraints: Restriction code: licenceUnrestricted Other constraints: This information is released under the Creative Commons license - No Rights Reserved - CC0 1.0 Universal (https://creativecommons.org/publicdomain/zero/1.0/). The person who associated a work with this deed has dedicated the work to the public domain by waiving all of his or her rights to the work worldwide under copyright law, including all related and neighboring rights, to the extent allowed by law. You can copy, modify, distribute and perform the work, even for commercial purposes, all without asking permission. Resource constraints: title: Liability and Warranty Legal constraints: Other constraints: All materials on this website are made available to GRIIDC and in turn to you "as-is." Content may only be submitted by an individual who represents and warrants that s/he has sufficient rights to be able to make the content available under a CC0 waiver. There is no warranty (expressed or implied) to these materials, their title, accuracy, non-infringement of third party rights, or fitness for any particular purpose, including the performance or results you may obtain from their use. Use these materials at your own risk. Under no circumstances shall GRIIDC be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use or the inability to use either this website or the materials available via this website. If you are dissatisfied with any website feature, content, or terms of use, your sole and exclusive remedy is to discontinue use. Aggregation Info: AggregateInformation: Aggregate Data Set Name: title: Related Publication Citation Citation: Title: Struch, R. E., Pulster, E. L., Schreier, A. M., & Murawski, S. A. (2019). Hepatobiliary Analyses Suggest Chronic PAH Exposure in Hakes (
                              Urophycis
                              spp.) Following the
                              Deepwater Horizon
                              Oil Spill. Environmental Toxicology and Chemistry. doi:10.1002/etc.4596
Date: inapplicable Aggregate Data Set Identifier: title: Related Publication DOI Identifier: Code: Anchor: xlink: https://dx.doi.org/10.1002/etc.4596 title: DOI doi:10.1002/etc.4596 Association Type: Association type code: crossReference Language: eng; USA Topic category: Topic category code: oceans Topic category: Topic category code: biota Topic category: Topic category code: environment Extent: Extent: Geographic element: Geographic bounding box: West bound longitude: -94.414333 East bound longitude: -85.372833 South bound latitude: 18.7499 North bound latitude: 29.749133 Geographic element: BoundingPolygon: Polygon: gml:MultiPoint: gml:pointMember: Point: gml:pos: 28.572117 -89.53705 gml:pointMember: Point: gml:pos: 29.2554 -87.70015 gml:pointMember: Point: gml:pos: 28.713383 -89.078933 gml:pointMember: Point: gml:pos: 28.713383 -89.078933 gml:pointMember: Point: gml:pos: 29.04475 -88.613983 gml:pointMember: Point: gml:pos: 28.516033 -89.604183 gml:pointMember: Point: gml:pos: 29.404867 -87.492267 gml:pointMember: Point: gml:pos: 29.404867 -87.492267 gml:pointMember: Point: gml:pos: 28.481617 -86.131167 gml:pointMember: Point: gml:pos: 29.4871 -86.67285 gml:pointMember: Point: gml:pos: 29.48385 -86.673917 gml:pointMember: Point: gml:pos: 29.042033 -88.618583 gml:pointMember: Point: gml:pos: 28.557833 -89.554217 gml:pointMember: Point: gml:pos: 29.405267 -87.496733 gml:pointMember: Point: gml:pos: 29.243183 -87.961333 gml:pointMember: Point: gml:pos: 29.292633 -87.993383 gml:pointMember: Point: gml:pos: 28.630783 -89.9919 gml:pointMember: Point: gml:pos: 29.291417 -86.662933 gml:pointMember: Point: gml:pos: 28.224017 -85.6475 gml:pointMember: Point: gml:pos: 29.324533 -86.6037 gml:pointMember: Point: gml:pos: 29.260533 -87.7324 gml:pointMember: Point: gml:pos: 29.481417 -86.6754 gml:pointMember: Point: gml:pos: 29.244633 -87.9599 gml:pointMember: Point: gml:pos: 28.989217 -88.6818 gml:pointMember: Point: gml:pos: 28.502283 -89.6011 gml:pointMember: Point: gml:pos: 29.329467 -87.5273 gml:pointMember: Point: gml:pos: 18.7499 -94.414333 gml:pointMember: Point: gml:pos: 19.565633 -92.721133 gml:pointMember: Point: gml:pos: 29.29705 -88.01325 gml:pointMember: Point: gml:pos: 28.552167 -85.372833 gml:pointMember: Point: gml:pos: 29.744433 -87.192533 gml:pointMember: Point: gml:pos: 29.249733 -87.9876 gml:pointMember: Point: gml:pos: 29.04475 -88.613983 gml:pointMember: Point: gml:pos: 29.462867 -87.43395 gml:pointMember: Point: gml:pos: 29.735667 -87.1869 gml:pointMember: Point: gml:pos: 28.747133 -89.193317 gml:pointMember: Point: gml:pos: 28.552117 -85.3739 gml:pointMember: Point: gml:pos: 29.749133 -87.0919 gml:pointMember: Point: gml:pos: 29.29105 -87.9796 gml:pointMember: Point: gml:pos: 29.5069 -87.3774 gml:pointMember: Point: gml:pos: 28.5659 -89.9539 Temporal element: Temporal extent: Extent: Time period: Description: ground condition Begin date: 2012-08-21 End date: 2015-09-24 Supplemental Information: The worksheet "Biometrics": Cruise (C-IMAGE I, C-IMAGE II); vESSEL (R/V Weatherbird II); Principal Investigator; Month ,Day, Year, (MM DD YYYY); Latitude (decimal degrees), Longitude (decimal degrees), Species, Transect/Station, Fish #, Disease, Sex, SL (Standard length, cm), TL (Total length, cm), TTL Wt. (Total weight, kg), Liver Wt. (kg), GI Wt. (Gastrointestinal tract weight, kg), Gonad Wt. (kg), Subarea, Country, Gonad SI (Gonadal Somatic Index), HSI (Hepatosomatic Index), GI -SI (Gastrointestinal Somatic Index), Fulton's K (Fulton's Condition Factor), Comments.
          
The worksheet "Hepatic PAHs": Year, Field ID, Species, Transect-Station, Fish#, MDL, Naphthalene (ng/g wet wt), C1 Naphthalene (ng/g wet wt), C2 Naphthalene (ng/g wet wt), C3 Naphthalene (ng/g wet wt), C4 Naphthalene (ng/g wet wt), Acenaphthylene (ng/g wet wt), Acenaphthene (ng/g wet wt), Fluorene (ng/g wet wt), C1 Fluorene (ng/g wet wt), C2 Fluorene (ng/g wet wt), C3 Fluorene (ng/g wet wt), C4 Fluorene (ng/g wet wt), Dibenzothiophene (ng/g wet wt), C1 Dibenzothiophene (ng/g wet wt) C2 Dibenzothiophene (ng/g wet wt), C3 Dibenzothiophene (ng/g wet wt), C4 Dibenzothiophene (ng/g wet wt), Phenanthrene (ng/g wet wt), Anthracene (ng/g wet wt), C1 Phenanthrene/Anthracene (ng/g wet wt), C2 Phenanthrene/Anthracene (ng/g wet wt), C3 Phenanthrene/Anthracene (ng/g wet wt), C4 Phenanthrene/Anthracene (ng/g wet wt), C5 Phenanthrene/Anthracene (ng/g wet wt), Fluoranthene (ng/g wet wt),Pyrene (ng/g wet wt), C1 Fluoranthene/Pyrene (ng/g wet wt), C2 Fluoranthene/Pyrene (ng/g wet wt), C3 Fluoranthene/Pyrene (ng/g wet wt), C4 Fluoranthene/Pyrene (ng/g wet wt), C5 Fluoranthene/Pyrene (ng/g wet wt), Benzo[A]anthracene (ng/g wet wt), Chrysene (ng/g wet wt), C1 Benzo[A]anthracene/Chrysene (ng/g wet wt), C2 Benzo[A]anthracene/Chrysene (ng/g wet wt), C3 Benzo[A]anthracene/Chrysene (ng/g wet wt), C4 Benzo[A]anthracene/Chrysene (ng/g wet wt), C5 Benzo[A]anthracene/Chrysene (ng/g wet wt), Benzo[b]fluoranthene (ng/g wet wt), Benzo[k]fluoranthene (ng/g wet wt), Benzo[e]pyrene (ng/g wet wt) Benzo[a]pyrene (ng/g wet wt), Perylene (ng/g wet wt), Indeno[1,2,3,-cd]pyrene (ng/g wet wt), Dibenzo[a,h]anthracene (ng/g wet wt) Benzo[g,h,i]perylene (ng/g wet wt), SumLivPAH (ng/g wet wt).
          
The worksheet "Definitions" contains the definitions of some of the parameters in the other worksheets, and are as follows:
          
          Nap Eq. (ng/g bile):    Naphthalene equivalents in ng per g of bile
          Phn Eq. (ng/g bile):    Phenanthrene equivalents in ng per g of bile
          BaP Eq. (ng/g bile):    Benzo[a]pyrene equivalents in ng per g of bile
          Liver tPAHs (ng/g w.w.):        Liver concentrations of total PAHs in ng per g of tissue wet weight
          SL (cm):        Standard length in centimeters
          TL (cm) :       Total length in centimeters
          TTL Wt. (kg):   Total weight in kilograms
          Liver Wt. (kg):         Liver weight in kilograms
          GI Wt. (kg):    Gastrointestinal tract weight in kilograms
Gonad Wt. (kg): Gonad weight in kilograms
          Gonad SI:       Gonadal Somatic Index
H.S.I.: HepatoSomatic Index GI –SI: Gastrointestinal Somatic Index
          Fulton's K:     Fulton's Condition Factor (K)
MDL: Method Detection Limit (1 ng/g) Subareas/regions: North Central Region of the Gulf of Mexico (NC), West Florida Shelf (WFS), Southwest Region of the Gulf of Mexico (SW).|PAHs were extracted from Liver samples using a modified QuEChERS (Bond Elut, Agilent Technologies, Santa Clara, CA, USA) method optimized specifically for these study species. Extracts were analyzed using Agilent’s 7890B gas chromatograph (GC) coupled to a 7010 tandem mass spectrometer (MS/MS) operating in multiple reactions mode (MRM).|||A performance-based QA/QC program was implemented to ensure acceptable levels of analytical accuracy and precision following the EPA’s Method 8270D and the National Oceanic and Atmospheric Administration’s quality assurance and quality control plan for DWH Natural Resource Damage Assessment. The program included the analysis of solvent blanks, procedural blanks, sample replicates, matrix spikes, blank spikes, and matrix-matched standards.|
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Distribution info: Distribution: Distributor: Distributor: Distributor contact: Responsible party: Organisation name: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC) Contact info: Contact: Phone: Telephone: Voice: 3618253604 Address: Address: Delivery point: 6300 Ocean Drive City: Corpus Christi Administrative area: TX Postal code: 78412 Country: USA Electronic mail address: griidc@gomri.org Online Resource: Online Resource: Linkage: URL: https://data.gulfresearchinitiative.org Role: Role code: distributor Distributor format: Format: Name: xlsx Version: inapplicable File decompression technique: zip Distributor transfer options: Digital transfer options: Transfer size: 0.1591 Online: Online Resource: Linkage: URL: https://data.gulfresearchinitiative.org/data/R6.x805.000:0071 Protocol: https Name: Data Landing Page Description: GRIIDC dataset landing page Function: Online function code: information
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Metadata maintenance: Maintenance information: Maintenance and update frequency: unknown Maintenance note: This ISO metadata record was automatically generated from information provided to GRIIDC for dataset: R6.x805.000:0071 on 2020-09-27T01:58:32-05:00
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