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Predator-prey diet linkages with error range for the Gulf of Mexico fitted using maximum likelihood method, April 2013- May 2015

Center for the Integrated Modeling and Analysis of Gulf Ecosystems II (C-IMAGE II)

DOI:
10.7266/N7SX6B5H
 
UDI:
R4.x267.182:0003
Last Update:
Jun 02 2016 18:14 UTC
 
Dataset Author(s):
Ainsworth, Cameron
Point of Contact:
Ainsworth, Cameron
University of South Florida / College of Marine Science
140 7th Ave South
St. Petersburg, Florida  33701
USA
ainsworth@usf.edu
Funding Source:
RFP-IV
Data Collection Period:
2013-04-01 to 2015-05-01

Identified Submitted Review Available
3 3 3 3

Abstract:

Data is from Tarnecki, J.H., Wallace, A., Simons, J. and Ainsworth, C.H. 2016. Progression of a Gulf of Mexico Food Web Supporting Atlantis Ecosystem Model Development. Fisheries Research (doi:10.1016/j.fishres.2016.02.023). This is a dataset representing predator-prey linkages with associated error ranges for Gulf of Mexico fish functional groups. The data will be used in an Atlantis biogeochemical trophic ecosystem model of the Gulf of Mexico described by Ainsworth et al. 2015 (NOAA Technical Memorandum NMFS-SEFSC-676). This diet dataset is based on data previously published in Masi, M.D., Ainsworth, C.H., Chagaris, D., 2014. (Ecol. Model. 284, 60-74) and expanded to include new original stomach sampling described by Tarnecki et al., as well as information collated in the Gulf of Mexico Species Interaction Database (GoMexSI) maintained by Jim Simons at Texas A&M Corpus Christi. The main improvement over the original Masi et al. diet matrix is that more species are considered and from a wider geographic range (including waters of the western Gulf of Mexico). Tarnecki et al use this improved diet matrix in Atlantis to show improved model performance; they also compared this revised diet matrix against previously published diet matrices for the Gulf of Mexico. The format of this data is similar to the original Masi et al. diet data located here: http://dx.doi.org/10.7266/N7Q23X72 (UDI: R1.x135.120:0007).

Purpose:

The purpose of this dataset is to provide an improved diet dataset for use an Atlantis Ecosystem Model.

Theme Keywords:

Diet composition, Stomach sampling, Gut content analysis, Atlantis ecosystem model

File Format:

CSV

Dataset Downloads:

3

Predator-prey diet linkages with error range for the Gulf of Mexico fitted using maximum likelihood method, April 2013- May 2015



Identification Information
Distribution Information
Metadata Maintenance Information

Metadata: 
  File identifier: 
      R4.x267.182-0003-metadata.xml
  Language: 
      eng; USA
  Character set: 
    Character set code: 
      utf8
  Hierarchy level: 
    Scope code: 
      dataset
  Metadata author: 
    Responsible party: 
      Individual name: 
          Richard McKenzie
      Organisation name: 
          University of South Florida
      Position name: 
          GIS Analyst
      Contact info: 
        Contact: 
          Phone: 
            Telephone: 
              Voice: 
                  813-974-2852
              Facsimile: 
          Address: 
            Address: 
              Delivery point: 
                  4202 E. Fowler Ave.
                  LIB122
              City: 
                  Tampa
              Administrative area: 
                  FL
              Postal code: 
                  33620
              Country: 
                  USA
              Electronic mail address: 
                  rwmcken2@usf.edu
      Role: 
        Role code: 
          pointOfContact
  Date stamp: 
      2016-06-10T16:42:50-05:00
  Metadata standard name: 
      ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
  Metadata standard version: 
      ISO 19115-2:2009(E)
  Dataset URI: 
      https://data.gulfresearchinitiative.org/metadata/R4.x267.182:0003
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Identification info: Data identification: Citation: Citation: Title: Predator-prey diet linkages with error range for the Gulf of Mexico fitted using maximum likelihood method, April 2013- May 2015 Alternate title: Date: Date: Date: 2016-06-02 Date type: Date type code: publication Abstract: Data is from Tarnecki, J.H., Wallace, A., Simons, J. and Ainsworth, C.H. 2016. Progression of a Gulf of Mexico Food Web Supporting Atlantis Ecosystem Model Development. Fisheries Research (doi:10.1016/j.fishres.2016.02.023). This is a dataset representing predator-prey linkages with associated error ranges for Gulf of Mexico fish functional groups. The data will be used in an Atlantis biogeochemical trophic ecosystem model of the Gulf of Mexico described by Ainsworth et al. 2015 (NOAA Technical Memorandum NMFS-SEFSC-676). This diet dataset is based on data previously published in Masi, M.D., Ainsworth, C.H., Chagaris, D., 2014. (Ecol. Model. 284, 60-74) and expanded to include new original stomach sampling described by Tarnecki et al., as well as information collated in the Gulf of Mexico Species Interaction Database (GoMexSI) maintained by Jim Simons at Texas A&M Corpus Christi. The main improvement over the original Masi et al. diet matrix is that more species are considered and from a wider geographic range (including waters of the western Gulf of Mexico). Tarnecki et al use this improved diet matrix in Atlantis to show improved model performance; they also compared this revised diet matrix against previously published diet matrices for the Gulf of Mexico. The format of this data is similar to the original Masi et al. diet data located here: http://dx.doi.org/10.7266/N7Q23X72 (UDI: R1.x135.120:0007). Purpose: The purpose of this dataset is to provide an improved diet dataset for use an Atlantis Ecosystem Model. Status: Progress code: completed Point of contact: Responsible party: Individual name: Cameron Ainsworth Organisation name: University of South Florida Position name: Professor Contact info: Contact: Phone: Telephone: Voice: 206-860-3289 Facsimile: Address: Address: Delivery point: 140 7th Ave South City: St. Petersburg Administrative area: FL Postal code: 33701 Country: USA Electronic mail address: ainsworth@usf.edu Role: Role code: pointOfContact Descriptive keywords: Keywords: Keyword: Diet composition Keyword: Stomach sampling Keyword: Gut content analysis Keyword: Atlantis ecosystem model Type: Keyword type code: theme Descriptive keywords: Keywords: Keyword: Gulf of Mexico Type: Keyword type code: place Language: eng; USA Topic category: Topic category code: oceans Topic category: Topic category code: biota Extent: Extent: Geographic element: Geographic bounding box: West bound longitude: -99 East bound longitude: -80 South bound latitude: 18 North bound latitude: 31 Geographic element: BoundingPolygon: Polygon: Polygon: Outer boundary: Linear ring: gml:posList: 18 -99 18 -80 31 -80 31 -99 18 -99 Temporal element: Temporal extent: Extent: Time period: Description: ground condition Begin date: 2013-04-01 End date: 2015-05-01 Supplemental Information: Column A: predator name. Column B: prey name. Column C: lower 95% confidence interval. Column D: upper 95% confidence interval. Column E: mode of the maximum likelihood marginal beta distribution (percent)|||||
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Distribution info: Distribution: Distributor: Distributor: Distributor contact: Responsible party: Organisation name: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC) Position name: Contact info: Contact: Phone: Telephone: Voice: +1-361-825-3604 Facsimile: +1-361-825-2050 Address: Address: Delivery point: 6300 Ocean Drive Unit 5869 City: Corpus Christi Administrative area: Texas Postal code: 78412-5869 Country: USA Electronic mail address: griidc@gomri.org Online Resource: Online Resource: Linkage: URL: http://data.gulfresearchinitiative.org Protocol: Role: Role code: distributor Distributor format: Format: Name: CSV Version: inapplicable File decompression technique: Distributor transfer options: Digital transfer options: Transfer size: 0.02 Online: Online Resource: Linkage: URL: https://data.gulfresearchinitiative.org/data/R4.x267.182:0003 Protocol:
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Metadata maintenance: Maintenance information: Maintenance and update frequency: unknown Maintenance note: This ISO metadata record was automatically generated by the GRIIDC Metadata Generator from DIF and Registry information provided to GRIIDC for dataset: R4.x267.182:0003 on 2016-06-02T17:37:05+00:00 Maintenance note: This ISO metadata record was created using the 'Check and Save to File' (with form validation) function of the GRIIDC ISO 19115-2 Metadata Editor on 2016-06-02T18:08:46+00:00
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