Videos for Atlantic Croaker Group Shoaling Dynamics

Relationship of Effects of Cardiac Outcomes in Fish for Validation of Ecological Risk (RECOVER)

DOI:
10.7266/N73N21WQ
 
UDI:
R4.x258.000:0047
Last Update:
May 31 2018 22:20 UTC
 
Dataset Author(s):
Khursigara, A., Esbaugh, A.
Point of Contact:
Esbaugh, Andrew
The University of Texas at Austin / Marine Science Institute
College of Natural Sciences 750 Channel View Drive
Port Aransas, Texas  78373
USA
a.esbaugh@austin.utexas.edu
Funding Source:
RFP-IV
 
Extent Description:
Dataset contains lab measurements, no field sampling.

Identified Submitted In-Review Available
3 3 3 3

Suggested Citation:

Khursigara, A., Esbaugh, A.. 2018. Videos for Atlantic Croaker Group Shoaling Dynamics. Distributed by: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC), Harte Research Institute, Texas A&M University–Corpus Christi. doi:10.7266/N73N21WQ

Abstract:

This study examined the influence of oil exposure on group dynamics in Atlantic croaker. Croaker were placed into an open field test for 20 minutes. Groups consisted of all controls, three controls with one exposed individual, or all exposed croaker. This dataset contains the videos for each group.

Purpose:

To investigate how oil exposure may influence group shoaling behavior.

Theme Keywords:

Atlantic Croaker, PAH, Shoaling, Group Dynamics

File Format:

xlsx, docx, mp4, txt

Cold Storage:

NOTE: Due to the large size of this dataset it has been archived to cold storage. The dataset file has been replaced by a manifest file with instructions on how to request this data: R4.x258.000.0047-manifest.zip (9.8 KB).

Filename:

R4.x258.000.0047.tar.gz (215.61 GB)

Dataset Downloads:

2

Videos for Atlantic Croaker Group Shoaling Dynamics



Identification Information
Distribution Information
Metadata Maintenance Information

Metadata: 
  File identifier: 
      R4.x258.000-0047-metadata.xml
  Language: 
      eng; USA
  Character set: 
    Character set code: 
      utf8
  Hierarchy level: 
    Scope code: 
      dataset
  Metadata author: 
    Responsible party: 
      Individual name: 
          Madeline Munoz-Bustamante
      Organisation name: 
          University of Miami / Rosenstiel School of Marine and Atmospheric Science
      Position name: 
          Program Manager
      Contact info: 
        Contact: 
          Phone: 
            Telephone: 
              Voice: 
              Facsimile: 
          Address: 
            Address: 
              Delivery point: 
                  4600 Rickenbacker Cswy
              City: 
                  Miami
              Administrative area: 
                  Florida
              Postal code: 
                  33149
              Country: 
                  USA
              Electronic mail address: 
                  mbustamante@rsmas.miami.edu
      Role: 
        Role code: 
          pointOfContact
  Date stamp: 
      2021-05-04T20:04:57+00:00
  Metadata standard name: 
      ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
  Metadata standard version: 
      ISO 19115-2:2009(E)
  Dataset URI: 
      https://data.gulfresearchinitiative.org/metadata/R4.x258.000:0047
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Identification info: Data identification: Citation: Citation: Title: Videos for Atlantic Croaker Group Shoaling Dynamics Alternate title: Date: Date: Date: 2018-06-05 Date type: Date type code: publication Identifier: Identifier: Code: Anchor: xlink: https://dx.doi.org/10.7266/N73N21WQ title: DOI doi:10.7266/N73N21WQ Abstract: This study examined the influence of oil exposure on group dynamics in Atlantic croaker. Croaker were placed into an open field test for 20 minutes. Groups consisted of all controls, three controls with one exposed individual, or all exposed croaker. This dataset contains the videos for each group. Purpose: To investigate how oil exposure may influence group shoaling behavior. Status: Progress code: completed Point of contact: Responsible party: Individual name: Andrew Esbaugh Organisation name: The University of Texas at Austin / Marine Science Institute Position name: Assistant Professor Contact info: Contact: Phone: Telephone: Voice: 3617496835 Facsimile: Address: Address: Delivery point: College of Natural Sciences 750 Channel View Drive City: Port Aransas Administrative area: Texas Postal code: 78373 Country: USA Electronic mail address: a.esbaugh@austin.utexas.edu Role: Role code: pointOfContact Descriptive keywords: Keywords: Keyword: Atlantic Croaker Keyword: PAH Keyword: Shoaling Keyword: Group Dynamics Type: Keyword type code: theme Descriptive keywords: Keywords: Keyword: inapplicable Type: Keyword type code: place Resource constraints: title: Cite As Constraints: Use limitation: Khursigara, A., Esbaugh, A.. 2018. Videos for Atlantic Croaker Group Shoaling Dynamics. Distributed by: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC), Harte Research Institute, Texas A&M University–Corpus Christi. doi:10.7266/N73N21WQ Resource constraints: title: CC0 License Legal constraints: Use constraints: Restriction code: licenceUnrestricted Other constraints: This information is released under the Creative Commons license - No Rights Reserved - CC0 1.0 Universal (https://creativecommons.org/publicdomain/zero/1.0/). The person who associated a work with this deed has dedicated the work to the public domain by waiving all of his or her rights to the work worldwide under copyright law, including all related and neighboring rights, to the extent allowed by law. You can copy, modify, distribute and perform the work, even for commercial purposes, all without asking permission. Resource constraints: title: Liability and Warranty Legal constraints: Other constraints: All materials on this website are made available to GRIIDC and in turn to you "as-is." Content may only be submitted by an individual who represents and warrants that s/he has sufficient rights to be able to make the content available under a CC0 waiver. There is no warranty (expressed or implied) to these materials, their title, accuracy, non-infringement of third party rights, or fitness for any particular purpose, including the performance or results you may obtain from their use. Use these materials at your own risk. Under no circumstances shall GRIIDC be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use or the inability to use either this website or the materials available via this website. If you are dissatisfied with any website feature, content, or terms of use, your sole and exclusive remedy is to discontinue use. Aggregation Info: AggregateInformation: Aggregate Data Set Name: title: Related Publication Citation Citation: Title: Armstrong, T., Khursigara, A. J., Killen, S. S., Fearnley, H., Parsons, K. J., & Esbaugh, A. J. (2019). Oil exposure alters social group cohesion in fish. Scientific Reports, 9(1). doi:10.1038/s41598-019-49994-1 Date: inapplicable Aggregate Data Set Identifier: title: Related Publication DOI Identifier: Code: Anchor: xlink: https://dx.doi.org/10.1038/s41598-019-49994-1 title: DOI doi:10.1038/s41598-019-49994-1 Association Type: Association type code: crossReference Language: eng; USA Topic category: Topic category code: biota Extent: Extent: Description: Dataset contains lab measurements, no field sampling. Supplemental Information: Group: cohort of four fish tested at one time (1-19); tag: colored tag for a specific fish (p: purple, y: yellow, g: green, o: orange); trtBROAD: broad, group-level treatment categorization (c: control, o: oil exposed, m: mixed group, one individual is exposed to oil the rest are controls); grouptrt: merged variable combining group and broad treatment; fish: merged fish ID combining group, treatment, and tag color; dose: dose of oil received by group (none, low, high); dose_ind: dose of oil received by individual (a, l, h); trtSPEC: specific treatment categorization, specifying high or low for groups receiving oil (control, low mix, low oil, high mix, high oil); untreat_type: level of treatment received by individuals not exposed to oil (c: control, mL: low mix, mH: high mix); TL: total length in cm; SL: standard length in cm; mass: mass in grams; speed: average speed in cm/s; speed_moving: average speed while in motion in cm/s; dist: total distance moved in cm; meanderREL: relative meander in degrees/cm; meanderABS: absolution meander in degrees/cm; NNmean: mean neighbor distance in cm; NNmin: nearest neighbor distance in cm; move: time spent moving in seconds; notmove: time spent motionless in seconds; distedge: mean distance from edge of the arena in cm.|Prior to being used, croaker were anesthetized with 0.25 g MS-222 (buffered in 0.5 NAHCO3) before being PIT tagged with “MiniHPT8” tags. While anesthetized, fish were tagged with a bead and mass, standard length, and total length was taken. Before 18/07/2016 fish were exposed to 6.0 ± 0.8 mg PAH (0.7 % MASS HEWAF, or low oil and low mix) and starting on 18/07/2016 fish were exposed to oil concentrations of 32.9 ± 5.9 mg PAH (2.0% MASS HEWAF, or high oil and high mix). All videos were recorded on the GoPros mounted to a mic stand to capture the video from above the tank. GoPro only allows a maximum of 17 minutes in a single video before starting a new one. Since our measured period for the open field test is 20 minutes, GoPro started a second video (OpenFB) to capture the last 3 minutes. Video file name format: Group and number.Date(MM-DD-YYY).Test|Beads and GoPro|Each individual was exposed in a 4L tank with 3L of water for 24 hours|All data were run through a general mixed model|
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Distribution info: Distribution: Distributor: Distributor: Distributor contact: Responsible party: Organisation name: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC) Contact info: Contact: Phone: Telephone: Voice: 3618253604 Address: Address: Delivery point: 6300 Ocean Drive City: Corpus Christi Administrative area: TX Postal code: 78412 Country: USA Electronic mail address: griidc@gomri.org Online Resource: Online Resource: Linkage: URL: https://data.gulfresearchinitiative.org Role: Role code: distributor Distributor format: Format: Name: xlsx, docx, mp4, txt Version: inapplicable File decompression technique: zip Distributor transfer options: Digital transfer options: Transfer size: 0.0098 Online: Online Resource: Linkage: URL: https://data.gulfresearchinitiative.org/data/R4.x258.000:0047 Protocol: https Name: Data Landing Page Description: GRIIDC dataset landing page Function: Online function code: information
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Metadata maintenance: Maintenance information: Maintenance and update frequency: unknown Maintenance note: This ISO metadata record was automatically generated from information provided to GRIIDC for dataset: R4.x258.000:0047 on 2021-07-29T05:10:44-05:00
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Dataset Links: