Abstract:
This dataset includes an inventory of Gulf of Mexico oceanic fauna data including species, weight, and measurements collected from R/V Point Sur (Cruise DP05) from 2017-05-01 to 2017-05-11. The main gear type used was a 10-m2 Multiple Opening Closing Net and Environmental Sensing System (MOCNESS). The MOCNESS was fitted with 6 nets which were opened according to the following depth scheme: net 0 from the surface to 1500m, net 1 from 1500-1200m, net 2 from 200-1000m, net 3 from 1000-600m, net 4 from 600-200m, and net 5 from 200m to the surface. Two trawls were conducted at each station sampled to capture diel vertical migration information; one during daylight hours between 9am-2:30pm CDT, and the other at 9pm-2:30am CDT. A table of the taxonomic hierarchy used in the nekton database is included with references to those scientific names recently updated which are not yet reflected by the Integrated Taxonomic Information System (www.itis.gov). The MOCNESS sensor data and ship data collected during cruise DP05 are available in GRIIDC datasets R4.x257.226:0009 and R4.x257.226:0014 respectively.
Suggested Citation:
April Cook and Tracey Sutton. 2018. Inventory of oceanic fauna data including species, weight, and measurements from R/V Point Sur (Cruise DP05) in the Gulf of Mexico from 2017-05-01 to 2017-05-11. Distributed by: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC), Harte Research Institute, Texas A&M University–Corpus Christi. doi:10.7266/N7902234
Publications:
Kupchik, M. J., Benfield, M. C., & Sutton, T. T. (2018). The First In Situ Encounter of Gigantura chuni (Giganturidae: Giganturoidei: Aulopiformes: Cyclosquamata: Teleostei), with a Preliminary Investigation of Pair-Bonding. Copeia, 106(4), 641–645. doi:10.1643/ce-18-034
Moore, J. A., Fenolio, D. B., Cook, A. B., & Sutton, T. T. (2020). Hiding in Plain Sight: Elopomorph Larvae Are Important Contributors to Fish Biodiversity in a Low-Latitude Oceanic Ecosystem. Frontiers in Marine Science, 7. doi:10.3389/fmars.2020.00169
MAPSTONE, G., & YOUNGBLUTH, M. (2020). <p><strong>New observations on the rare physonect <em>Melophysa</em> <em>melo</em> (Siphonophora; Agalmatidae) from the northern Gulf of Mexico</strong></p>. Zootaxa, 4732(1), 117–137. doi:10.11646/zootaxa.4732.1.5
Baker, L. J., Freed, L. L., Easson, C. G., Lopez, J. V., Fenolio, D., Sutton, T. T., … Hendry, T. A. (2019). Diverse deep-sea anglerfishes share a genetically reduced luminous symbiont that is acquired from the environment. eLife, 8. doi:10.7554/elife.47606
Woodstock, M. S., Blanar, C. A., & Sutton, T. T. (2020). Diet and parasites of a mesopelagic fish assemblage in the Gulf of Mexico. Marine Biology, 167(12). doi:10.1007/s00227-020-03796-6
Clark, K. A., Vecchione, M., Seibel, B. A., & Judkins, H. L. (2021). Species Abundance, Spatial and Vertical Distributions, and Eye-Size Trends of Large Heteropods (Pterotracheidae and Carinariidae) in the Northern Gulf of Mexico. American Malacological Bulletin, 38(2). doi:10.4003/006.038.0201
Bos, R. P., Sutton, T. T., & Frank, T. M. (2021). State of Satiation Partially Regulates the Dynamics of Vertical Migration. Frontiers in Marine Science, 8. doi:10.3389/fmars.2021.607228
Purpose:
Inventory of biological and environmental data to capture diel vertical migration information.
Data Parameters and Units:
File “DP05_Trawl_Data.xlsx”: EntryNum (Automatic number uniquely identifies each record); TrawlNo (Unique identifier for each trawl deployment); TrawlNo_NetNo (Unique identifier for use in queries); Cruise_Name (Name of the vessel); Cruise_No (Cruise number); Gear (Sample method; MOC10 = 10 meter MOCNESS Net); StationID (NRDA Station ID); SolarCycle (Day/Night sampling time (D = day (exclusive of twilights) and N = night (exclusive of twilights))); NetNo (Net Number (1m^2 MOCNESS: 0-7)); SampleID (NRDA unique identifier for each sample); SampleDate (Sample date (DDMMMYY) when trawl was deployed); StartLat (Start latitude in decimal degrees); StartLon (Start longitude in decimal degrees); EndLat (End latitude in decimal degrees); EndLon (End longitude in decimal degrees); TowStartTime_CDT (Tow/transect start time in local time (central daylight time)); TowEndTime_CDT (Tow/transect end time in local time (central daylight time)); ElapsedTime (Time elapsed between tow start and end times - Hours:Minutes); MOC10FileName (MOC10 filename (.PRO)); MinDepth (Minimum depth of net sampling (m)); MaxDepth (Maximum depth of net sampling (m)); DepthRange (Depth Range = minimum sampling depth – maximum sampling depth (m)); DepthCode (1: 1500-1200m, 2:1200-1000m, 3:1000-600m, 4:600-200m, 5: 200-0m, 1a:1500-1000m, 1b:1300-1200m, 3a:1000-0m, 3b:800-600m, 3c:900-800m, 3d:1000-800m, 4a: 600-400m, 4b:400-200m, 4c:600-0m, 4d:500-0m, 5a:200-100m, 5b:100-0 m); DepthBin (Represents the depth bin used for analysis when binning samples; 1: 1500-1200m, 2:1200-1000m, 3:1000-600m, 4:600-200m, 5: 200-0m); MaxWaterDepth (Maximum water column depth (m)); MaxDeployDepth (Maximum depth of net during that deployment); DepthUnits (Depth units (m)); Volume (Volume filtered by the net calculated by the MOCNESS software); VolUnits (Volume filtered units (m^3)); Quant_or_Meat (Meat: Incorrect or missing flow data or the net ripped, Non-Standard: Net fished depth ranges other than strict depth bins 1-5, Quantitative: Net fished correct depth strata and has valid flow data, X: Net did not open, no sample collected); NetMeshSize (Net mesh size); NetMeshSizeUnits (Net mesh size units (mm)); SampPres (Sample preservation); Comments (Sample notes); All5NetsQuant (True if nets 1-5 are all quantitative; this column is only used for analysis purposes); File “DP05_Nekton_Database.xlsx”: EntryNumber (Automatic number to uniquely identify entries); SampleID (Unique identifier for each Sample); TaxonomicRank (Taxon level in a taxonomic hierarchy); Lowest_Taxonomic_Identification (Taxonomic identification to the level of 100% confidence); Taxon_Comments (Comments related to the identification of the animal); Counts (Count of individuals in the taxonomic group in the sample); WetWeight_kg (Wet weight (kg) recorded at sea by motion-compensating scale with a 1.0 g resolution (blank values did not register a weight)); PostFormWeight (Weight (g) recorded after being preserved in 10% formalin); PostEthWeight (Weight (g) recorded after being preserved in 70% ethanol); PostIsoWeight (Weight (g) recorded after being preserved in 50% isopropyl); LifeHistory_Stage (Life stage of nekton if known (Larvae; Post-larvae; Transforming Juvenile; Juvenile; Adult)); Sex (Gender); Genetics_YN (Tissue sample or whole animal sampled for genetic barcoding and/or population genetics/connectivity studies); SIA_YN (Whole animal frozen -20 for Dr. David Wells/Travis Richards Stable Isotope studies (TAMUG)); PAH_YN (Whole animal or dissected animal frozen -20 for Dr. Isabel Romero for PAH studies (USF CMS)); CSIA_YN (Tissue sample or whole animal preserved in liquid nitrogen (TAMUG)); Hg_YN (Whole animal frozen -20 for Dr. Chad Hammerschmidt (chad.hammerschmidt@wright.edu) at Wright State University (WSU)); Photo_YN (Photographed by Dante Fenolio at sea); Disposition (Lab or container tracking the sample; Default value=“Bucket” which means it was placed into the sample jar collected in the field and resides at NSU; “DPXXXX” if placed into a separate jar; TAMUG/WSU/FRANK/USFSP/USF designates the lab to which the sample was sent)); Comments (Sample comments); LengthUnits (unit of measure for length (mm)); ST_Length_1 through ST_Length_25 (Length of organism; Squid - mantle length; fish - standard length on most fish, total length for eels; Shrimp - Carapace length); File “Taxon_List_through_DP05_061818.xlsx”: LowestTaxonomicIDStandard (The lowest taxonomic identification made); TaxonomicRank (Taxon level in a taxonomic hierarchy); FunctionalGroup (Groupings according to similar acoustic signatures); Species; Genus; Tribe; Subfamily; Family; Superfamily; Subsection; Section; Infraorder; Suborder; Order; Superorder; Infraclass; Subclass; Class; Superclass; Subphylum; Phylum; Kingdom; Reference; Gelzoop (gelatinous zooplankton)
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