Inventory of Gulf of Mexico oceanic fauna data including species, weight, and measurements from R/V Point Sur (Cruises DP03 and DP04) May-August, 2016

Deep-Pelagic Nekton Dynamics of the Gulf of Mexico (DEEPEND)

DOI:
10.7266/N7XP7385
 
UDI:
R4.x257.226:0004
Last Update:
Sep 20 2017 00:29 UTC
 
Dataset Author(s):
April Cook and Tracey Sutton
Point of Contact:
Cook, April
Nova Southeastern University / Halmos College of Natural Sciences and Oceanography
3301 College Ave
Fort Lauderdale, Florida  33314
USA
acook1@nova.edu
Funding Source:
RFP-IV
Data Collection Period:
2016-05-01 to 2016-08-18

Identified Submitted In-Review Available
3 3 3 3

Suggested Citation:

April Cook and Tracey Sutton (2017) Inventory of Gulf of Mexico oceanic fauna data including species, weight, and measurements from R/V Point Sur (Cruises DP03 and DP04) May-August, 2016. Distributed by: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC), Harte Research Institute, Texas A&M University-Corpus Christi. doi:10.7266/N7XP7385

Abstract:

This data set includes the biological and environmental data for all of the species collected during the DP03 (May 2016) and DP04 cruises (August 2016). The main gear type used was a 10-m2 Multiple Opening Closing Net and Environmental Sensing System (MOCNESS). The MOCNESS was fitted with 6 nets which were opened according to the following depth scheme: net 0 from the surface to 1500m, net 1 from 1500-1200m, net 2 from 200-1000m, net 3 from 1000-600m, net 4 from 600-200m, and net 5 from 200m to the surface. Two trawls were conducted at each station sampled to capture diel vertical migration information; one during daylight hours between 9am-2:30pm CDT, and the other at 9pm-2:30am CDT. A dipnet and a neuston net were also used to collect sargassum and other animals from the surface for genetic and stable isotope analyses. A table of the taxonomic hierarchy used in the nekton database is included with references to those scientific names recently updated which are not yet reflected by the Integrated Taxonomic Information System (www.itis.gov).The MOCNESS sensor data and ship data collected during cruise DP03 are available in GRIIDC datasets R4.x257.226:0007 and R4.x257.226:0012 respectively and for cruise DP04 in GRIIDC datasets R4.x257.226:0008 and R4.x257.226:0013 respectively.

Purpose:

Inventory of biological and environmental data for cruises DP03 and DP04 for use in DEEPEND publications.

Theme Keywords:

taxonomy, mesopelagic, environmental data

File Format:

xlsx

Filename:

DP03_04_taxonomy.zip (1.32 MB)

Dataset Downloads:

22

Inventory of Gulf of Mexico oceanic fauna data including species, weight, and measurements from R/V Point Sur (Cruises DP03 and DP04) May-August, 2016



Identification Information
Distribution Information
Metadata Maintenance Information

Metadata: 
  File identifier: 
      R4.x257.226-0004-metadata.xml
  Language: 
      eng; USA
  Character set: 
    Character set code: 
      utf8
  Hierarchy level: 
    Scope code: 
      dataset
  Metadata author: 
    Responsible party: 
      Individual name: 
          Matthew Johnston
      Organisation name: 
          Nova Southeastern University / Halmos College of Natural Sciences and Oceanography
      Position name: 
          Research Scientist
      Contact info: 
        Contact: 
          Phone: 
            Telephone: 
              Voice: 
                  9542623641
              Facsimile: 
          Address: 
            Address: 
              Delivery point: 
                  3301 College Ave
              City: 
                  Fort Lauderdale
              Administrative area: 
                  Florida
              Postal code: 
                  33314
              Country: 
                  USA
              Electronic mail address: 
                  johnmatt@nova.edu
      Role: 
        Role code: 
          pointOfContact
  Date stamp: 
      2018-08-11T13:42:11+00:00
  Metadata standard name: 
      ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
  Metadata standard version: 
      ISO 19115-2:2009(E)
  Dataset URI: 
      https://data.gulfresearchinitiative.org/metadata/R4.x257.226:0004
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Identification info: Data identification: Citation: Citation: Title: Inventory of Gulf of Mexico oceanic fauna data including species, weight, and measurements from R/V Point Sur (Cruises DP03 and DP04) May-August, 2016 Alternate title: Date: Date: Date: 2017-09-19 Date type: Date type code: publication Abstract: This data set includes the biological and environmental data for all of the species collected during the DP03 (May 2016) and DP04 cruises (August 2016). The main gear type used was a 10-m2 Multiple Opening Closing Net and Environmental Sensing System (MOCNESS). The MOCNESS was fitted with 6 nets which were opened according to the following depth scheme: net 0 from the surface to 1500m, net 1 from 1500-1200m, net 2 from 200-1000m, net 3 from 1000-600m, net 4 from 600-200m, and net 5 from 200m to the surface. Two trawls were conducted at each station sampled to capture diel vertical migration information; one during daylight hours between 9am-2:30pm CDT, and the other at 9pm-2:30am CDT. A dipnet and a neuston net were also used to collect sargassum and other animals from the surface for genetic and stable isotope analyses. A table of the taxonomic hierarchy used in the nekton database is included with references to those scientific names recently updated which are not yet reflected by the Integrated Taxonomic Information System (www.itis.gov).The MOCNESS sensor data and ship data collected during cruise DP03 are available in GRIIDC datasets R4.x257.226:0007 and R4.x257.226:0012 respectively and for cruise DP04 in GRIIDC datasets R4.x257.226:0008 and R4.x257.226:0013 respectively. Purpose: Inventory of biological and environmental data for cruises DP03 and DP04 for use in DEEPEND publications. Status: Progress code: completed Point of contact: Responsible party: Individual name: April Cook Organisation name: Nova Southeastern University / Halmos College of Natural Sciences and Oceanography Position name: Project Manager Contact info: Contact: Phone: Telephone: Voice: 9542623733 Facsimile: Address: Address: Delivery point: 3301 College Ave City: Fort Lauderdale Administrative area: Florida Postal code: 33314 Country: USA Electronic mail address: acook1@nova.edu Role: Role code: pointOfContact Descriptive keywords: Keywords: Keyword: taxonomy Keyword: mesopelagic Keyword: environmental data Type: Keyword type code: theme Descriptive keywords: Keywords: Keyword: Gulf of Mexico Type: Keyword type code: place Language: eng; USA Topic category: Topic category code: oceans Topic category: Topic category code: biota Extent: Extent: Geographic element: Geographic bounding box: West bound longitude: -90.11003333 East bound longitude: -85.9326 South bound latitude: 26.88875 North bound 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gml:LineStringSegment: gml:posList: 27.51938333 -88.99601667 27.40161667 -89.01986667 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 27.51048333 -89.011 27.58656667 -88.91793333 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 27.52016667 -87.98136667 27.42 -87.99775 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 27.49321667 -87.97278333 27.4677 -87.78778333 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.00665 -87.50863333 27.9398 -87.42233333 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.0343 -87.50473333 27.94016667 -87.48836667 Temporal element: Temporal extent: Extent: Time period: Description: ground condition Begin date: 2016-05-01 End date: 2016-08-18 Supplemental Information: File: DP03_04 Trawl Data.xlsx: EntryNum (Automatic number uniquely identifies each record); TrawlNo (Unique identifier for each trawl deployment); TrawlNo_NetNo (Unique identifier for use in queries); Cruise_Name (Name of the Vessel); Cruise_No (Cruise Number); Gear (Sample Method; MOC10 = 10 meter MOCNESS Net; TT = Tucker Trawl; NN = Neuston Net; BN = Bongo Net; DIP = Dipnet at the surface); StationID (NRDA Station ID); SolarCycle (Day/Night sampling time (D = day (exclusive of twilights) and N = night (exclusive of twilights))); NetNo (Net Number (Bongo: L-left, R-Right; Neuston: 1; 1m2 MOCNESS: 0-7)); SampleID (NRDA Unique Identifier for each Sample); SampleDate (Sample Date (DDMMMYY) when trawl was deployed); StartLat (Start Latitude in Dec degrees); StartLon (Start Longitude in Dec degrees); EndLat (End Latitude in Dec degrees); EndLon (End Longitude in Dec degrees); TowStartTime_CDT (Tow/Transect Start Time in local time (central daylight time)); TowEndTime_CDT (Tow/Transect End Time in local time (central daylight time)); ElapsedTime (Time elapsed between tow start and end times - Hours:Minutes (__ __:__ __)); MOC10FileName (MOC10 File Name (.PRO)); MinDepth (Minimum depth of net sampling m); MaxDepth (Maximum depth of net sampling m); DepthRange (Depth Range (min sampling depth – maximum sampling depth) m); DepthCode (1: 1500-1200m, 2:1200-1000m, 3:1000-600m, 4:600-200m, 5: 200-0m, 1a:1500-1000m, 1b:1300-1200m, 3a:1000-0m, 3b:800-600m, 3c:900-800m, 3d:1000-800m, 4a: 600-400m, 4b:400-200m, 4c:600-0m, 4d:500-0m, 5a:200-100m, 5b:100-0 m); DepthBin (Represents the depth bin used for analysis when binning samples; 1: 1500-1200m, 2:1200-1000m, 3:1000-600m, 4:600-200m, 5: 200-0m); MaxWaterDepth (Maximun Water Column Depth (m)); MaxDeployDepth (Maximum Depth of net during that Deployment); DepthUnits (Depth Units (m)); Volume (Volume Filtered by the net calculated by the MOCNESS software); VolUnits (Volume Filtered Units); Quant_or_Meat (Meat: Incorrect or missing flow data or the net ripped, Non-Standard: Net fished depth ranges other than strict depth bins 1-5, Quantitative: Net fished correct depth strata and has valid flow data, X: Net did not open, no sample collected); NetMeshSize (Net Mesh Size); NetMeshSizeUnits (Net Mesh Size Units (mm or um)); SampPres (Sample Preservation); Comments (Sample Notes); All5NetsQuant (True if nets 1-5 are all quantitative; this column is only used for analysis purposes); File: DP03_04 Nekton Database.xlsx: EntryNumber (Automatic number to uniquely identify entries); SampleID (Unique Identifier for each Sample); TaxonomicRank (Taxon level in a taxonomic hierarchy); Lowest_Taxonomic_Identification (Taxonomic identification to the level of 100% confidence); Taxon_Comments (Comments related to the identification of the animal); Counts (Count of individuals in the taxonomic group in the sample); WetWeight_kg (Wet weight (kg) recorded at sea by motion-compensating scale with a 1.0 g resolution (blank values did not register a weight)); PostFormWeight (Weight (g) recorded after being preserved in 10% formalin); PostEthWeight (Weight (g) recorded after being preserved in 70% ethanol); PostIsoWeight (Weight (g) recorded after being preserved in 50% isopropyl); LifeHistory_Stage (Life stage of nekton if known (Larvae; Post-larvae; Transforming Juvenile; Juvenile; Adult)); Sex (Gender); Genetics_YN (Tissue sample or whole animal sampled for genetic barcoding and/or population genetics/connectivity studies); SIA_YN (Whole animal frozen -20 for Dr. David Wells/Travis Richards Stable Isotope studies (TAMUG)); PAH_YN (Whole animal or dissected animal frozen -20 for Dr. Isabel Romero for PAH studies (USF CMS)); CSIA_YN (Tissue sample or whole animal preserved in liquid nitrogen (TAMUG)); Hg_YN (Whole animal frozen -20 for Dr. Chad Hammerschmidt (chad.hammerschmidt@wright.edu) at Wright State University (WSU)); Photo_YN (Photographed by Dante Fenolio at sea); Disposition (Lab or container tracking the sample; Default value=“Bucket” which means it was placed into the sample jar collected in the field and resides at NSU; “DPXXXX” if placed into a separate jar; TAMUG/WSU/FRANK/USFSP/USF designates the lab to which the sample was sent)); Comments (Sample comments); LengthUnits (unit of measure for length); ST_Length_1 through ST_Length_25 (Length of organism; Squid - mantle length; fish - standard length on most fish, total length for eels; Shrimp - Carapace length); File: Taxon_List_through_DP04_091917.xlsx: LowestTaxonomicIDStandard (The lowest taxonomic identification made); TaxonomicRank (Taxon level in a taxonomic hierarchy); FunctionalGroup (Groupings according to similar acoustic signatures); Species; Genus; Tribe; Subfamily; Family; Superfamily; Subsection; Section; Infraorder; Suborder; Order; Superorder; Infraclass; Subclass; Class; Superclass; Subphylum; Phylum; Kingdom; Reference; Gelzoop|||||
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Distribution info: Distribution: Distributor: Distributor: Distributor contact: Responsible party: Organisation name: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC) Contact info: Contact: Phone: Telephone: Voice: 3618253604 Address: Address: Delivery point: 6300 Ocean Drive City: Corpus Christi Administrative area: TX Postal code: 78412 Country: USA Electronic mail address: griidc@gomri.org Online Resource: Online Resource: Linkage: URL: https://data.gulfresearchinitiative.org Role: Role code: distributor Distributor format: Format: Name: xlsx Version: inapplicable File decompression technique: zip Distributor transfer options: Digital transfer options: Transfer size: 1.3167 Online: Online Resource: Linkage: URL: https://data.gulfresearchinitiative.org/data/R4.x257.226:0004 Protocol: https Name: Data Landing Page Description: GRIIDC dataset landing page Function: Online function code: information
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Metadata maintenance: Maintenance information: Maintenance and update frequency: unknown Maintenance note: This ISO metadata record was automatically generated from information provided to GRIIDC for dataset: R4.x257.226:0004 on 2020-01-21T19:30:40-06:00
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