Inventory of Gulf oceanic fauna data including species, weight, and measurements, Pisces cruises from Dec. 1 2010 - Sept. 29, 2011 in the northern Gulf of Mexico

Deep-Pelagic Nekton Dynamics of the Gulf of Mexico (DEEPEND)

DOI:
10.7266/N7R49NTN
 
UDI:
R4.x257.000:0009
Last Update:
Feb 16 2017 22:01 UTC
 
Dataset Author(s):
Sutton, Tracey and April Cook, Jon Moore, Tamara Frank, Heather Judkins, Michael Vecchione, Martha Nizinski, and Marshall Youngbluth
Point of Contact:
Sutton, Tracey
Nova Southeastern University / Halmos College of Natural Sciences and Oceanography
3301 College Ave
Fort Lauderdale, Florida  33314
USA
tsutton1@nova.edu
Funding Source:
RFP-IV
Data Collection Period:
2010-12-02 to 2011-09-27

Identified Submitted In-Review Available
3 3 3 3

Suggested Citation:

Sutton, Tracey and April Cook, Jon Moore, Tamara Frank, Heather Judkins, Michael Vecchione, Martha Nizinski, and Marshall Youngbluth. 2017. Inventory of Gulf oceanic fauna data including species, weight, and measurements, Pisces cruises from Dec. 1 2010 - Sept. 29, 2011 in the northern Gulf of Mexico. Distributed by: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC), Harte Research Institute, Texas A&M University–Corpus Christi. doi:10.7266/N7R49NTN

Abstract:

This data set includes the biological and environmental data for all of the species collected during the Pisces cruises from Dec. 2010 - September 2011. The main gear type used was a Polytron rope trawl. Four trawls were conducted at each station sampled to capture diel vertical migration information; one deep and one shallow during daylight hours between 9am-2:30pm CDT, and one deep one shallow between 9pm-2:30am CDT. A table of the taxonomic hierarchy used in the nekton database will be included with references to those scientific names recently updated which are not yet reflected by the Integrated Taxonomic Information System (www.itis.gov).

Purpose:

Inventory of biological data for Pisces for use in DEEPEND publications.

Theme Keywords:

taxonomy, mesopelagic

File Format:

docx, xlsx

Filename:

NRDA_Pisces_111416.zip (2.66 MB)

Dataset Downloads:

17

Inventory of Gulf oceanic fauna data including species, weight, and measurements, Pisces cruises from Dec. 1 2010 - Sept. 29, 2011 in the northern Gulf of Mexico



Identification Information
Distribution Information
Metadata Maintenance Information

Metadata: 
  File identifier: 
      R4.x257.000-0009-metadata.xml
  Language: 
      eng; USA
  Character set: 
    Character set code: 
      utf8
  Hierarchy level: 
    Scope code: 
      dataset
  Metadata author: 
    Responsible party: 
      Individual name: 
          Tracey Sutton
      Organisation name: 
          Nova Southeastern University / Halmos College of Natural Sciences and Oceanography
      Position name: 
          Associate Professor
      Contact info: 
        Contact: 
          Phone: 
            Telephone: 
              Voice: 
                  9542623692
              Facsimile: 
          Address: 
            Address: 
              Delivery point: 
                  3301 College Ave
              City: 
                  Fort Lauderdale
              Administrative area: 
                  Florida
              Postal code: 
                  33314
              Country: 
                  USA
              Electronic mail address: 
                  tsutton1@nova.edu
      Role: 
        Role code: 
          pointOfContact
  Date stamp: 
      2018-08-11T13:37:24+00:00
  Metadata standard name: 
      ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
  Metadata standard version: 
      ISO 19115-2:2009(E)
  Dataset URI: 
      https://data.gulfresearchinitiative.org/metadata/R4.x257.000:0009
Return To Index

Identification info: Data identification: Citation: Citation: Title: Inventory of Gulf oceanic fauna data including species, weight, and measurements, Pisces cruises from Dec. 1 2010 - Sept. 29, 2011 in the northern Gulf of Mexico Alternate title: Inventory of Gulf oceanic fauna data from Pisces cruises Date: Date: Date: 2017-02-16 Date type: Date type code: publication Identifier: Identifier: Code: Anchor: xlink: https://dx.doi.org/10.7266/N7R49NTN title: DOI doi:10.7266/N7R49NTN Abstract: This data set includes the biological and environmental data for all of the species collected during the Pisces cruises from Dec. 2010 - September 2011. The main gear type used was a Polytron rope trawl. Four trawls were conducted at each station sampled to capture diel vertical migration information; one deep and one shallow during daylight hours between 9am-2:30pm CDT, and one deep one shallow between 9pm-2:30am CDT. A table of the taxonomic hierarchy used in the nekton database will be included with references to those scientific names recently updated which are not yet reflected by the Integrated Taxonomic Information System (www.itis.gov). Purpose: Inventory of biological data for Pisces for use in DEEPEND publications. Status: Progress code: completed Point of contact: Responsible party: Individual name: Tracey Sutton Organisation name: Nova Southeastern University / Halmos College of Natural Sciences and Oceanography Position name: Associate Professor Contact info: Contact: Phone: Telephone: Voice: 9542623692 Facsimile: Address: Address: Delivery point: 3301 College Ave City: Fort Lauderdale Administrative area: Florida Postal code: 33314 Country: USA Electronic mail address: tsutton1@nova.edu Role: Role code: pointOfContact Descriptive keywords: Keywords: Keyword: taxonomy Keyword: mesopelagic Type: Keyword type code: theme Descriptive keywords: Keywords: Keyword: Gulf of Mexico Type: Keyword type code: place Resource constraints: title: Cite As Constraints: Use limitation: Sutton, Tracey and April Cook, Jon Moore, Tamara Frank, Heather Judkins, Michael Vecchione, Martha Nizinski, and Marshall Youngbluth. 2017. Inventory of Gulf oceanic fauna data including species, weight, and measurements, Pisces cruises from Dec. 1 2010 - Sept. 29, 2011 in the northern Gulf of Mexico. Distributed by: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC), Harte Research Institute, Texas A&M University–Corpus Christi. doi:10.7266/N7R49NTN Resource constraints: title: CC0 License Legal constraints: Use constraints: Restriction code: licenceUnrestricted Other constraints: This information is released under the Creative Commons license - No Rights Reserved - CC0 1.0 Universal (https://creativecommons.org/publicdomain/zero/1.0/). The person who associated a work with this deed has dedicated the work to the public domain by waiving all of his or her rights to the work worldwide under copyright law, including all related and neighboring rights, to the extent allowed by law. You can copy, modify, distribute and perform the work, even for commercial purposes, all without asking permission. Resource constraints: title: Liability and Warranty Legal constraints: Other constraints: All materials on this website are made available to GRIIDC and in turn to you "as-is." Content may only be submitted by an individual who represents and warrants that s/he has sufficient rights to be able to make the content available under a CC0 waiver. There is no warranty (expressed or implied) to these materials, their title, accuracy, non-infringement of third party rights, or fitness for any particular purpose, including the performance or results you may obtain from their use. Use these materials at your own risk. Under no circumstances shall GRIIDC be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use or the inability to use either this website or the materials available via this website. If you are dissatisfied with any website feature, content, or terms of use, your sole and exclusive remedy is to discontinue use. Aggregation Info: AggregateInformation: Aggregate Data Set Name: title: Related Publication Citation Citation: Title: D’Elia, M., Warren, J. D., Rodriguez-Pinto, I., Sutton, T. T., Cook, A., & Boswell, K. M. (2016). Diel variation in the vertical distribution of deep-water scattering layers in the Gulf of Mexico. Deep Sea Research Part I: Oceanographic Research Papers, 115, 91–102. doi:10.1016/j.dsr.2016.05.014 Date: inapplicable Aggregate Data Set Identifier: title: Related Publication DOI Identifier: Code: Anchor: xlink: https://dx.doi.org/10.1016/j.dsr.2016.05.014 title: DOI doi:10.1016/j.dsr.2016.05.014 Association Type: Association type code: crossReference Aggregation Info: AggregateInformation: Aggregate Data Set Name: title: Related Publication Citation Citation: Title: Judkins, H., Vecchione, M., Cook, A., & Sutton, T. (2016). Diversity of midwater cephalopods in the northern Gulf of Mexico: comparison of two collecting methods. Marine Biodiversity. doi:10.1007/s12526-016-0597-8 Date: inapplicable Aggregate Data Set Identifier: title: Related Publication DOI Identifier: Code: Anchor: xlink: https://dx.doi.org/10.1007/s12526-016-0597-8 title: DOI doi:10.1007/s12526-016-0597-8 Association Type: Association type code: crossReference Aggregation Info: AggregateInformation: Aggregate Data Set Name: title: Related Publication Citation Citation: Title: Mohan, J. A., Sutton, T. T., Cook, A. B., Boswell, K. M., & David Wells, R. J. (2017). Influence of oceanographic conditions on abundance and distribution of post-larval and juvenile carangid fishes in the northern Gulf of Mexico. Fisheries Oceanography. doi:10.1111/fog.12214 Date: inapplicable Aggregate Data Set Identifier: title: Related Publication DOI Identifier: Code: Anchor: xlink: https://dx.doi.org/10.1111/fog.12214 title: DOI doi:10.1111/fog.12214 Association Type: Association type code: crossReference Aggregation Info: AggregateInformation: Aggregate Data Set Name: title: Related Publication Citation Citation: Title: Judkins, H., Vecchione, M., & Rosario, K. (2016). Morphological and molecular evidence of <I>Heteroteuthis dagamensis</I> in the Gulf of Mexico. Bulletin of Marine Science, 92(1), 51–57. doi:10.5343/bms.2015.1061 Date: inapplicable Aggregate Data Set Identifier: title: Related Publication DOI Identifier: Code: Anchor: xlink: https://dx.doi.org/10.5343/bms.2015.1061 title: DOI doi:10.5343/bms.2015.1061 Association Type: Association type code: crossReference Aggregation Info: AggregateInformation: Aggregate Data Set Name: title: Related Publication Citation Citation: Title: Kupchik, M. J., Benfield, M. C., & Sutton, T. T. (2018). The First In Situ Encounter of Gigantura chuni (Giganturidae: Giganturoidei: Aulopiformes: Cyclosquamata: Teleostei), with a Preliminary Investigation of Pair-Bonding. Copeia, 106(4), 641–645. doi:10.1643/ce-18-034 Date: inapplicable Aggregate Data Set Identifier: title: Related Publication DOI Identifier: Code: Anchor: xlink: https://dx.doi.org/10.1643/ce-18-034 title: DOI doi:10.1643/ce-18-034 Association Type: Association type code: crossReference Aggregation Info: AggregateInformation: Aggregate Data Set Name: title: Related Publication Citation Citation: Title: Sutton, T. T., Frank, T., Judkins, H., & Romero, I. C. (2019). As Gulf Oil Extraction Goes Deeper, Who Is at Risk? Community Structure, Distribution, and Connectivity of the Deep-Pelagic Fauna. Scenarios and Responses to Future Deep Oil Spills, 403–418. doi:10.1007/978-3-030-12963-7_24 Date: inapplicable Aggregate Data Set Identifier: title: Related Publication DOI Identifier: Code: Anchor: xlink: https://dx.doi.org/10.1007/978-3-030-12963-7_24 title: DOI doi:10.1007/978-3-030-12963-7_24 Association Type: Association type code: crossReference Aggregation Info: AggregateInformation: Aggregate Data Set Name: title: Related Publication Citation Citation: Title: Moore, J. A., Fenolio, D. B., Cook, A. B., & Sutton, T. T. (2020). Hiding in Plain Sight: Elopomorph Larvae Are Important Contributors to Fish Biodiversity in a Low-Latitude Oceanic Ecosystem. Frontiers in Marine Science, 7. doi:10.3389/fmars.2020.00169 Date: inapplicable Aggregate Data Set Identifier: title: Related Publication DOI Identifier: Code: Anchor: xlink: https://dx.doi.org/10.3389/fmars.2020.00169 title: DOI doi:10.3389/fmars.2020.00169 Association Type: Association type code: crossReference Aggregation Info: AggregateInformation: Aggregate Data Set Name: title: Related Publication Citation Citation: Title: Baker, L. J., Freed, L. L., Easson, C. G., Lopez, J. V., Fenolio, D., Sutton, T. T., … Hendry, T. A. (2019). Diverse deep-sea anglerfishes share a genetically reduced luminous symbiont that is acquired from the environment. eLife, 8. doi:10.7554/elife.47606 Date: inapplicable Aggregate Data Set Identifier: title: Related Publication DOI Identifier: Code: Anchor: xlink: https://dx.doi.org/10.7554/eLife.47606 title: DOI doi:10.7554/eLife.47606 Association Type: Association type code: crossReference Aggregation Info: AggregateInformation: Aggregate Data Set Name: title: Related Publication Citation Citation: Title: Davis, A. L., Sutton, T. T., Kier, W. M., & Johnsen, S. (2020). Evidence that eye-facing photophores serve as a reference for counterillumination in an order of deep-sea fishes. Proceedings of the Royal Society B: Biological Sciences, 287(1928), 20192918. doi:10.1098/rspb.2019.2918 Date: inapplicable Aggregate Data Set Identifier: title: Related Publication DOI Identifier: Code: Anchor: xlink: https://dx.doi.org/10.1098/rspb.2019.2918 title: DOI doi:10.1098/rspb.2019.2918 Association Type: Association type code: crossReference Language: eng; USA Topic category: Topic category code: oceans Topic category: Topic category code: biota Extent: Extent: Geographic element: Geographic bounding box: West bound longitude: -91.14904 East bound longitude: -87.3458 South bound latitude: 26.758 North bound latitude: 29.06543 Geographic element: BoundingPolygon: Polygon: gml:MultiCurve: gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.4433 -87.48168 28.63089 -87.50891 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.60341 -87.5209 28.39806 -87.48037 gml:curveMember: gml:Curve: gml:segments: 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gml:segments: gml:LineStringSegment: gml:posList: 27.1061 -90.0268 27.0057 -90.0452 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 26.88858 -89.89558 26.79509 -89.82684 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 27.0234 -91.0047 26.8707 -90.9633 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 27.0343 -90.99497 26.86422 -91.02201 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 26.8612 -90.9839 26.758 -90.9256 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 27.07914 -90.9194 27.00108 -90.99592 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 27.4833 -88.5214 27.646 -88.5457 Temporal element: Temporal extent: Extent: Time period: Description: ground condition Begin date: 2010-12-02 End date: 2011-09-27 Supplemental Information: Worksheet: Pisces_FieldSampleData: DeploymentID (Unique identifier for each trawl deployment); Cruise_Name (Name of the Vessel); Cruise_No (Cruise Number); FilterMethod (Filter Method (Gear); HSR Trawl, IH Trawl, IHM Trawl, IYGP Trawl); StationID (NRDA Station ID); DayNightSample (Day/Night sampling time (D = day (exclusive of twilights) and N = night (exclusive of twilights))); SampleID (NRDA Unique Identifier for each Sample); SampDateStart (Sample Date (DDMMMYY) when trawl was deployed); StartLat (Start Latitude in Dec degrees); StartLon (Start Longitude in Dec degrees); EndLat (End Latitude in Dec degrees); EndLon (End Longitude in Dec degrees); TowStartTime (Tow/Transect Start Time in, HH:MM:SS); TowEndTime (Tow/Transect End Time in, HH:MM:SS); UpperDepth (Minimum depth of net sampling); LowerDepth (Maximum depth of net sampling); DepthUnits (Depth Units (m)); Volume (Volume Filtered by the net calculated by the MOCNESS software); VolUnits (Volume Filtered Units); NetMeshSize (Net Mesh Size); NetMeshSizeUnits (Net Mesh Size Units (mm or um)); SampPres (Sample Preservation); TrawlOpNo (Unique operation number within each cruise); Worksheet Pisces_NektonDatabase: EntryNumber (Automatic number to uniquely identify entries); DataEntry_Date (Date the data was entered MM/DD/YYYY; can be used to identify entries created or refined after the data had been made public in the NOAA NRDA Data Integration Visualization Exploration and Reporting (DIVER) website (http://dwhdiver.orr.noaa.gov/)); Sample_ID (Unique Identifier for each Sample); Client_ID (Unique Identifier for each Sample Split (Sample_ID + Disposition)); Lowest_Taxonomic_Identification (Taxonomic identification to the level of 100% confidence); Taxon_Comments (Comments related to the identification of the animal); Counts (Count of individuals in the taxonomic group in the sample); WetWeight_kg (Wet weight (kg) recorded at sea by motion-compensating scale with a 1.0 g resolution (blank values did not register a weight)); PostForm_Weight (Weight (g) recorded after being preserved in 10% formalin); PostEth_Weight (Weight (g) recorded after being preserved in 70% ethanol); PostIso_Weight (Weight (g) recorded after being preserved in 50% isopropyl); Calculated_Biomass (Post-etoh value if measured; If not measured directly, the calculated value using a best fit trendline per taxonomic group (fish, gelzoo, cephs, shrimp) plotted from entries with both a post-formalin and post-ethanol weight); LifeHistory_Stage (Life stage of nekton if known (Larvae;Post-larvae;Transforming Juvenile;Juvenile;Adult)); Sex (Gender); TypeSpecimen_YN (True if a representative specimen was kept for identification validation); Photo_YN (True if photographed for record keeping of taxonomic representatives); Disposition (Lab or container tracking the sample; Default value=“Bucket” which means it was preserved in 10% formalin and placed into the sample jar collected in the field; “PSXXXX” if placed into a separate jar; “Frozen” if frozen whole at sea and resides in freezer at NSU; “DISCRD” if sample was destroyed); Comments (Sample comments); Tag_No (Voucher tag number(s) if tissue sample was taken); LengthUnits (unit of measure for length); ST_Length_1 through ST_Length_25 (Length of organism; Squid - mantle length; fish - standard length on most fish, total length for eels; Shrimp - Carapace length; Jellyfish – bell diameter; Heteropods-total length); Worksheet Taxon_List: Lowest_Taxonomic_ID_Standard (The lowest taxonomic identification made); TaxonomicRank (Taxon level in a taxonomic hierarchy); FunctionalGroup (Groupings according to similar acoustic signatures; SBF –fish with a swim bladder, Crust/NSBF – crustacean or fish with no swim bladder, LgNSBF – Large fish with no swim bladder, Unclassified – acoustic signature not classified, Zooplankton – small zooplankton); Species (Species); Genus (Genus); Tribe (Tribe); Subfamily (Subfamily); Family (Family); Superfamily (Superfamily); Infraorder (Infraorder); Suborder (Suborder); Order (Order); Superorder (Superorder); Infraclass (Infraclass); Subclass (Subclass); Class (Class); Superclass (Superclass); Subphylum (Subphylum); Phylum (Phylum); Kingdom (Kingdom); Reference (Reference source for taxa without hierarchies listed in ITIS); GelZoop (Identifies gelatinous zooplankton taxa; Used for query/analysis purposes); VerticalDistPattern (1. Holoepipelagic NM; 2. Nyctopelagic Synch DM; 3. Meso Asynch VM; 4. Deep meso/bathy Asynch VM; 5. Meso NM; 6. Deep meso/bathy NM; 7. bathy NM); Habitat (deep demersal; coastal demersal; epipelagic; mesopelagic; meso/bathypelagic; bathypelagic); Metadata File: Metadata_Pisces_NDB_111416.docx |||||
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Distribution info: Distribution: Distributor: Distributor: Distributor contact: Responsible party: Organisation name: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC) Contact info: Contact: Phone: Telephone: Voice: 3618253604 Address: Address: Delivery point: 6300 Ocean Drive City: Corpus Christi Administrative area: TX Postal code: 78412 Country: USA Electronic mail address: griidc@gomri.org Online Resource: Online Resource: Linkage: URL: https://data.gulfresearchinitiative.org Role: Role code: distributor Distributor format: Format: Name: docx, xlsx Version: inapplicable File decompression technique: zip Distributor transfer options: Digital transfer options: Transfer size: 2.6573 Online: Online Resource: Linkage: URL: https://data.gulfresearchinitiative.org/data/R4.x257.000:0009 Protocol: https Name: Data Landing Page Description: GRIIDC dataset landing page Function: Online function code: information
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Metadata maintenance: Maintenance information: Maintenance and update frequency: unknown Maintenance note: This ISO metadata record was automatically generated from information provided to GRIIDC for dataset: R4.x257.000:0009 on 2020-08-09T06:01:37-05:00
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Publications:

D’Elia, M., Warren, J. D., Rodriguez-Pinto, I., Sutton, T. T., Cook, A., & Boswell, K. M. (2016). Diel variation in the vertical distribution of deep-water scattering layers in the Gulf of Mexico. Deep Sea Research Part I: Oceanographic Research Papers, 115, 91–102. doi:10.1016/j.dsr.2016.05.014

Judkins, H., Vecchione, M., Cook, A., & Sutton, T. (2016). Diversity of midwater cephalopods in the northern Gulf of Mexico: comparison of two collecting methods. Marine Biodiversity. doi:10.1007/s12526-016-0597-8

Mohan, J. A., Sutton, T. T., Cook, A. B., Boswell, K. M., & David Wells, R. J. (2017). Influence of oceanographic conditions on abundance and distribution of post-larval and juvenile carangid fishes in the northern Gulf of Mexico. Fisheries Oceanography. doi:10.1111/fog.12214

Judkins, H., Vecchione, M., & Rosario, K. (2016). Morphological and molecular evidence of <I>Heteroteuthis dagamensis</I> in the Gulf of Mexico. Bulletin of Marine Science, 92(1), 51–57. doi:10.5343/bms.2015.1061

Kupchik, M. J., Benfield, M. C., & Sutton, T. T. (2018). The First In Situ Encounter of Gigantura chuni (Giganturidae: Giganturoidei: Aulopiformes: Cyclosquamata: Teleostei), with a Preliminary Investigation of Pair-Bonding. Copeia, 106(4), 641–645. doi:10.1643/ce-18-034

Sutton, T. T., Frank, T., Judkins, H., & Romero, I. C. (2019). As Gulf Oil Extraction Goes Deeper, Who Is at Risk? Community Structure, Distribution, and Connectivity of the Deep-Pelagic Fauna. Scenarios and Responses to Future Deep Oil Spills, 403–418. doi:10.1007/978-3-030-12963-7_24

Moore, J. A., Fenolio, D. B., Cook, A. B., & Sutton, T. T. (2020). Hiding in Plain Sight: Elopomorph Larvae Are Important Contributors to Fish Biodiversity in a Low-Latitude Oceanic Ecosystem. Frontiers in Marine Science, 7. doi:10.3389/fmars.2020.00169

Baker, L. J., Freed, L. L., Easson, C. G., Lopez, J. V., Fenolio, D., Sutton, T. T., … Hendry, T. A. (2019). Diverse deep-sea anglerfishes share a genetically reduced luminous symbiont that is acquired from the environment. eLife, 8. doi:10.7554/elife.47606

Davis, A. L., Sutton, T. T., Kier, W. M., & Johnsen, S. (2020). Evidence that eye-facing photophores serve as a reference for counterillumination in an order of deep-sea fishes. Proceedings of the Royal Society B: Biological Sciences, 287(1928), 20192918. doi:10.1098/rspb.2019.2918

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