Photosynthetic pigment composition data (benthic microalgae) from Barataria Bay, 2011-2014

Accelerating Recovery after the Deepwater Horizon Oil Spill: Response of the Plant-Microbial-Benthic Ecosystem to Mitigation Strategies Promoting Wetland Remediation and Resilience

DOI:
10.7266/N7DN430F
 
UDI:
R2.x211.000:0003
Last Update:
Oct 01 2015 21:38 UTC
 
Dataset Author(s):
Fleeger, John
Point of Contact:
Fleeger, John
Louisiana State University / Department of Biological Sciences
202 Life Sciences Building
Baton Rouge, Louisiana  70803
USA
zoflee@lsu.edu
Funding Source:
RFP-II
Data Collection Period:
2011-05-15 to 2014-04-17

Identified Submitted In-Review Available
3 3 3 3

Suggested Citation:

Fleeger, John. 2015. Photosynthetic pigment composition data (benthic microalgae) from Barataria Bay, 2011-2014. Distributed by: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC), Harte Research Institute, Texas A&M University–Corpus Christi. doi:10.7266/N7DN430F

Abstract:

Benthic microalgal biomass (using the concentration of chlorophyll a as a proxy) and photosynthetic pigment composition of samples collected from Barataria Bay, Louisiana from 2011-2014 in a study of the effects of and recovery from the Deepwater Horizon Oil Spill are presented here. Samples were collected the salt marsh platform in the intertidal region in areas expected to be dominated by Spartina alterniflora. Data are presented as ug pigment per sample for chlorophyll a, fucoxanthin, pheophytin and zeaxanthin.

Purpose:

To determine the effects and recovery from the Deepwater Horizon oil spill on benthic microalgae in marshes that were oiled. Oiling categories include reference (with no visible oil and healthy vegetation), lightly, moderately and heavily oiled. These data are the basis of a publication, Fleeger J. W., K. R. Carman, M. R. Riggio, I. A. Mendelssohn, Q. Lin, A. Hou, D. R. Deis, and S. Zengel. 2015. Recovery of saltmarsh benthic microalgae and meiofauna following the Deepwater Horizon Oil Spill linked to recovery of Spartina alterniflora. Marine Ecology-Progress Series, 536:39-54.

Theme Keywords:

benthic microalgae, photosynthetic pigments, algal biomass, oil spill effects, oil spill recovery

File Format:

xlsx

Filename:

Benthic microalgae pigment data from 2011-2014.xlsx (85.03 KB)

Dataset Downloads:

10

Photosynthetic pigment composition data (benthic microalgae) from Barataria Bay, 2011-2014



Identification Information
Distribution Information
Metadata Maintenance Information

Metadata: 
  File identifier: 
      R2.x211.000-0003-metadata.xml
  Language: 
      eng; USA
  Character set: 
    Character set code: 
      utf8
  Hierarchy level: 
    Scope code: 
      dataset
  Metadata author: 
    Responsible party: 
      Individual name: 
          John Fleeger
      Organisation name: 
          Louisiana State University / Department of Biological Sciences
      Position name: 
          Emeritus Professor
      Contact info: 
        Contact: 
          Phone: 
            Telephone: 
              Voice: 
                  2255781738
              Facsimile: 
          Address: 
            Address: 
              Delivery point: 
                  202 Life Sciences Building
              City: 
                  Baton Rouge
              Administrative area: 
                  Louisiana
              Postal code: 
                  70803
              Country: 
                  USA
              Electronic mail address: 
                  zoflee@lsu.edu
      Role: 
        Role code: 
          pointOfContact
  Date stamp: 
      2021-05-04T20:04:56+00:00
  Metadata standard name: 
      ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
  Metadata standard version: 
      ISO 19115-2:2009(E)
  Dataset URI: 
      https://data.gulfresearchinitiative.org/metadata/R2.x211.000:0003
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Identification info: Data identification: Citation: Citation: Title: Photosynthetic pigment composition data (benthic microalgae) from Barataria Bay, 2011-2014 Alternate title: Benthic microalgae data Date: Date: Date: 2015-10-05 Date type: Date type code: publication Identifier: Identifier: Code: Anchor: xlink: https://dx.doi.org/10.7266/N7DN430F title: DOI doi:10.7266/N7DN430F Abstract: Benthic microalgal biomass (using the concentration of chlorophyll a as a proxy) and photosynthetic pigment composition of samples collected from Barataria Bay, Louisiana from 2011-2014 in a study of the effects of and recovery from the Deepwater Horizon Oil Spill are presented here. Samples were collected the salt marsh platform in the intertidal region in areas expected to be dominated by Spartina alterniflora. Data are presented as ug pigment per sample for chlorophyll a, fucoxanthin, pheophytin and zeaxanthin. Purpose: To determine the effects and recovery from the Deepwater Horizon oil spill on benthic microalgae in marshes that were oiled. Oiling categories include reference (with no visible oil and healthy vegetation), lightly, moderately and heavily oiled. These data are the basis of a publication, Fleeger J. W., K. R. Carman, M. R. Riggio, I. A. Mendelssohn, Q. Lin, A. Hou, D. R. Deis, and S. Zengel. 2015. Recovery of saltmarsh benthic microalgae and meiofauna following the Deepwater Horizon Oil Spill linked to recovery of Spartina alterniflora. Marine Ecology-Progress Series, 536:39-54. Status: Progress code: completed Point of contact: Responsible party: Individual name: John Fleeger Organisation name: Louisiana State University / Department of Biological Sciences Position name: Emeritus Professor Contact info: Contact: Phone: Telephone: Voice: 2255781738 Facsimile: Address: Address: Delivery point: 202 Life Sciences Building City: Baton Rouge Administrative area: Louisiana Postal code: 70803 Country: USA Electronic mail address: zoflee@lsu.edu Role: Role code: pointOfContact Descriptive keywords: Keywords: Keyword: benthic microalgae Keyword: photosynthetic pigments Keyword: algal biomass Keyword: oil spill effects Keyword: oil spill recovery Type: Keyword type code: theme Descriptive keywords: Keywords: Keyword: Barataria Bay, Louisiana Type: Keyword type code: place Resource constraints: title: Cite As Constraints: Use limitation: Fleeger, John. 2015. Photosynthetic pigment composition data (benthic microalgae) from Barataria Bay, 2011-2014. Distributed by: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC), Harte Research Institute, Texas A&M University–Corpus Christi. doi:10.7266/N7DN430F Resource constraints: title: CC0 License Legal constraints: Use constraints: Restriction code: licenceUnrestricted Other constraints: This information is released under the Creative Commons license - No Rights Reserved - CC0 1.0 Universal (https://creativecommons.org/publicdomain/zero/1.0/). The person who associated a work with this deed has dedicated the work to the public domain by waiving all of his or her rights to the work worldwide under copyright law, including all related and neighboring rights, to the extent allowed by law. You can copy, modify, distribute and perform the work, even for commercial purposes, all without asking permission. Resource constraints: title: Liability and Warranty Legal constraints: Other constraints: All materials on this website are made available to GRIIDC and in turn to you "as-is." Content may only be submitted by an individual who represents and warrants that s/he has sufficient rights to be able to make the content available under a CC0 waiver. There is no warranty (expressed or implied) to these materials, their title, accuracy, non-infringement of third party rights, or fitness for any particular purpose, including the performance or results you may obtain from their use. Use these materials at your own risk. Under no circumstances shall GRIIDC be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use or the inability to use either this website or the materials available via this website. If you are dissatisfied with any website feature, content, or terms of use, your sole and exclusive remedy is to discontinue use. Aggregation Info: AggregateInformation: Aggregate Data Set Name: title: Related Publication Citation Citation: Title: Fleeger, J., Carman, K., Riggio, M., Mendelssohn, I., Lin, Q., Hou, A., … Zengel, S. (2015). Recovery of salt marsh benthic microalgae and meiofauna following the Deepwater Horizon oil spill linked to recovery of Spartina alterniflora. Mar. Ecol. Prog. Ser., 536, 39–54. doi:10.3354/meps11451 Date: inapplicable Aggregate Data Set Identifier: title: Related Publication DOI Identifier: Code: Anchor: xlink: https://dx.doi.org/10.3354/meps11451 title: DOI doi:10.3354/meps11451 Association Type: Association type code: crossReference Aggregation Info: AggregateInformation: Aggregate Data Set Name: title: Related Publication Citation Citation: Title: Fleeger, J. W., Riggio, M. R., Mendelssohn, I. A., Lin, Q., Hou, A., & Deis, D. R. (2017). Recovery of saltmarsh meiofauna six years after the Deepwater Horizon oil spill. Journal of Experimental Marine Biology and Ecology. doi:10.1016/j.jembe.2017.03.001 Date: inapplicable Aggregate Data Set Identifier: title: Related Publication DOI Identifier: Code: Anchor: xlink: https://dx.doi.org/10.1016/j.jembe.2017.03.001 title: DOI doi:10.1016/j.jembe.2017.03.001 Association Type: Association type code: crossReference Aggregation Info: AggregateInformation: Aggregate Data Set Name: title: Related Publication Citation Citation: Title: Johnson, D. S., Fleeger, J. W., Riggio, M. R., Mendelssohn, I. A., Lin, Q., Graham, S. A., … Hou, A. (2018). Saltmarsh plants, but not fertilizer, facilitate invertebrate recolonization after an oil spill. Ecosphere, 9(1), e02082. doi:10.1002/ecs2.2082 Date: inapplicable Aggregate Data Set Identifier: title: Related Publication DOI Identifier: Code: Anchor: xlink: https://dx.doi.org/10.1002/ecs2.2082 title: DOI doi:10.1002/ecs2.2082 Association Type: Association type code: crossReference Aggregation Info: AggregateInformation: Aggregate Data Set Name: title: Related Publication Citation Citation: Title: Fleeger, J. W., Riggio, M. R., Mendelssohn, I. A., Lin, Q., Deis, D. R., Johnson, D. S., … Hou, A. (2018). What Promotes the Recovery of Salt Marsh Infauna After Oil Spills? Estuaries and Coasts. doi:10.1007/s12237-018-0443-2 Date: inapplicable Aggregate Data Set Identifier: title: Related Publication DOI Identifier: Code: Anchor: xlink: https://dx.doi.org/10.1007/s12237-018-0443-2 title: DOI doi:10.1007/s12237-018-0443-2 Association Type: Association type code: crossReference Language: eng; USA Topic category: Topic category code: biota Topic category: Topic category code: environment Topic category: Topic category code: oceans Extent: Extent: Geographic element: Geographic bounding box: West bound longitude: -89.94647 East bound longitude: -89.88492 South bound latitude: 29.4406 North bound latitude: 29.47495 Geographic element: BoundingPolygon: Polygon: gml:MultiPoint: gml:pointMember: Point: gml:pos: 29.4622 -89.92577 gml:pointMember: Point: gml:pos: 29.46202 -89.92854 gml:pointMember: Point: gml:pos: 29.46624 -89.93355 gml:pointMember: Point: gml:pos: 29.46869 -89.93079 gml:pointMember: Point: gml:pos: 29.46926 -89.92708 gml:pointMember: Point: gml:pos: 29.47227 -89.92883 gml:pointMember: Point: gml:pos: 29.47495 -89.93376 gml:pointMember: Point: gml:pos: 29.46045 -89.92133 gml:pointMember: Point: gml:pos: 29.45439 -89.8977 gml:pointMember: Point: gml:pos: 29.45914 -89.94647 gml:pointMember: Point: gml:pos: 29.47042 -89.89387 gml:pointMember: Point: gml:pos: 29.46539 -89.91216 gml:pointMember: Point: gml:pos: 29.46095 -89.88492 gml:pointMember: Point: gml:pos: 29.44812 -89.92171 gml:pointMember: Point: gml:pos: 29.4406 -89.90432 gml:pointMember: Point: gml:pos: 29.45843 -89.9092 gml:pointMember: Point: gml:pos: 29.45563 -89.88975 gml:pointMember: Point: gml:pos: 29.45673 -89.8863 gml:pointMember: Point: gml:pos: 29.44893 -89.93904 gml:pointMember: Point: gml:pos: 29.44105 -89.93337 gml:pointMember: Point: gml:pos: 29.45087 -89.89541 Temporal element: Temporal extent: Extent: Time period: Description: ground condition Begin date: 2011-05-15 End date: 2014-04-17 Supplemental Information: Data for each pigment are presented as ug pigment per sample or per g dry wt. Volumes are those used after extraction. Treatment codes are RF for reference samples, MD for moderately oiled and HV for heavily oiled. |Photosynthetic pigments were extracted from entire sediment samples with 4 ml of 100% acetone. The sediment-acetone mixture was sonicated for 30 s. The mixture was refrigerated overnight before centrifugation for 10 min. Samples were filtered (0.2 µm) before analysis. |High pressure liquid chromatography (HPLC) was used to examine photosynthetic pigment concentration and composition. A Hewlett Packard 1100 liquid chromatograph consisting of a 100-ml loop autosampler, a quaternary solvent delivery system coupled to a diode array spectrophotometer, and a Hewlett Packard 1046A fluorescent detector, were used. Hewlett Packard HPChem-Station software was used for data analysis.|Samples were taken at about 6 mo intervals. Two sets of sampling stations were established, but with different objectives and therefore with different sample designs, within 3 m of the shoreline in the microtidal intertidal zone. Shoreline Cleanup Assessment Technique data, field observations and, subsequently, our measures of total petroleum hydrocarbons were used to assign an oiling intensity level at each station. “Short-term Sites” were located between co-ordinates N 29.44064- 29.4449, W 89.89014- 89.89000 and consisted of replicated (n = 4), 50 m2 plots located along a linear shoreline distance of ~800 m. “Long-term Sites” consisted of 21 individual stations located over a much larger area (8 km x 5 km, between co-ordinates N 29.44060- 29.47459, W 89.88492- 89.94647). Sampling sites were selected with the explicit objective of determining effects and recovery of biota exposed to different oiling intensities, and were randomly stratified among three partially interspersed oiling categories within the designated sampling area; seven received no visible oiling, designated “reference”, seven were “moderately oiled” and seven were “heavily oiled”.|No error analysis is presented here but samples for each treatment - date combination are replicated. Replication was variable because some samples were not run in the HPLC because they were deemed to have an oil concentration that would harm the column.|
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Distribution info: Distribution: Distributor: Distributor: Distributor contact: Responsible party: Organisation name: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC) Contact info: Contact: Phone: Telephone: Voice: 3618253604 Address: Address: Delivery point: 6300 Ocean Drive City: Corpus Christi Administrative area: TX Postal code: 78412 Country: USA Electronic mail address: griidc@gomri.org Online Resource: Online Resource: Linkage: URL: https://data.gulfresearchinitiative.org Role: Role code: distributor Distributor format: Format: Name: xlsx Version: inapplicable File decompression technique: Distributor transfer options: Digital transfer options: Transfer size: 0.085 Online: Online Resource: Linkage: URL: https://data.gulfresearchinitiative.org/data/R2.x211.000:0003 Protocol: https Name: Data Landing Page Description: GRIIDC dataset landing page Function: Online function code: information
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Metadata maintenance: Maintenance information: Maintenance and update frequency: unknown Maintenance note: This ISO metadata record was automatically generated from information provided to GRIIDC for dataset: R2.x211.000:0003 on 2021-07-29T04:37:01-05:00
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