Longline trap data collected during R/V Apalachee cruise AP-1312 in the Northern Gulf of Mexico from 2013-10-08 to 2013-10-15

Deepsea to Coast Connectivity in the Eastern Gulf of Mexico (DEEP-C)

DOI:
10.7266/N78P5XHK
 
UDI:
R1.x138.079:0050
Last Update:
Nov 11 2015 01:50 UTC
 
Dataset Author(s):
Grubbs, Dean
Point of Contact:
Grubbs, R. Dean
Florida State University / Coastal and Marine Laboratory
3012 Westcott North
Tallahassee, Florida  32306
USA
dgrubbs@bio.fsu.edu
Funding Source:
RFP-I
Data Collection Period:
2013-10-08 to 2013-10-15

Identified Submitted In-Review Available
3 3 3 3

Suggested Citation:

Grubbs, Dean (2015) Longline trap data collected during R/V Apalachee cruise AP-1312 in the Northern Gulf of Mexico from 2013-10-08 to 2013-10-15. Distributed by: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC), Harte Research Institute, Texas A&M University-Corpus Christi. doi:10.7266/N78P5XHK

Abstract:

This dataset reports species caught using longline and trap sets during the R/V Apalachee cruise from October 8-15, 2013. Species data includes species name, sex, weight, length, and maturity state, if available. It also report if samples were collected from individuals for other analyses, though the results of those analyses are not reported here. Information about the sets include bait used, gear, effort, and sea state. Additional files in the dataset report pressure and temperature data collected during longline trapping activities. The overall objectives of this research include using large chevron traps and demersal longlines to describe and examine differences in the species assemblages and relative abundances of demersal fishes associated with the eastern and western walls of DeSoto Canyon and the adjacent continental slope (75-2000 m deep) and collecting specimens and samples (including curation of new species) to aid in resolving phylogenetic uncertainties and understanding life history traits in collected taxa.

Purpose:

To evaluate the biological diversity and trophic interactions among organisms ranging from primary producers to apex predators and from the deep-sea benthos to the coast. These data contribute to a food web model used to determine risks to ecosystem structure and function and regional economies following from extreme anthropogenic events (e.g., discharged and background hydrocarbon) and adaptive management strategies.

Theme Keywords:

Benthic Ecology, Physiology, Toxicology, Taxonomy, Deep Water Ecology, Community Ecology

File Format:

csv, xlsx

Filename:

R1.x138.0790050.zip (661.66 KB)

Dataset Downloads:

13

Longline trap data collected during R/V Apalachee cruise AP-1312 in the Northern Gulf of Mexico from 2013-10-08 to 2013-10-15



Identification Information
Distribution Information
Metadata Maintenance Information

Metadata: 
  File identifier: 
      R1.x138.079-0050-metadata.xml
  Language: 
      eng; USA
  Character set: 
    Character set code: 
      utf8
  Hierarchy level: 
    Scope code: 
      dataset
  Metadata author: 
    Responsible party: 
      Individual name: 
          R. Dean Grubbs
      Organisation name: 
          Florida State University / Coastal and Marine Laboratory
      Position name: 
          Associate Director of Research
      Contact info: 
        Contact: 
          Phone: 
            Telephone: 
              Voice: 
                  8506972067
              Facsimile: 
          Address: 
            Address: 
              Delivery point: 
                  3012 Westcott North
              City: 
                  Tallahassee
              Administrative area: 
                  Florida
              Postal code: 
                  32306
              Country: 
                  USA
              Electronic mail address: 
                  dgrubbs@bio.fsu.edu
      Role: 
        Role code: 
          pointOfContact
  Date stamp: 
      2018-08-11T13:42:28+00:00
  Metadata standard name: 
      ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
  Metadata standard version: 
      ISO 19115-2:2009(E)
  Dataset URI: 
      https://data.gulfresearchinitiative.org/metadata/R1.x138.079:0050
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Identification info: Data identification: Citation: Citation: Title: Longline trap data collected during R/V Apalachee cruise AP-1312 in the Northern Gulf of Mexico from 2013-10-08 to 2013-10-15 Alternate title: Date: Date: Date: 2014-04-01 Date type: Date type code: publication Abstract: This dataset reports species caught using longline and trap sets during the R/V Apalachee cruise from October 8-15, 2013. Species data includes species name, sex, weight, length, and maturity state, if available. It also report if samples were collected from individuals for other analyses, though the results of those analyses are not reported here. Information about the sets include bait used, gear, effort, and sea state. Additional files in the dataset report pressure and temperature data collected during longline trapping activities. The overall objectives of this research include using large chevron traps and demersal longlines to describe and examine differences in the species assemblages and relative abundances of demersal fishes associated with the eastern and western walls of DeSoto Canyon and the adjacent continental slope (75-2000 m deep) and collecting specimens and samples (including curation of new species) to aid in resolving phylogenetic uncertainties and understanding life history traits in collected taxa. Purpose: To evaluate the biological diversity and trophic interactions among organisms ranging from primary producers to apex predators and from the deep-sea benthos to the coast. These data contribute to a food web model used to determine risks to ecosystem structure and function and regional economies following from extreme anthropogenic events (e.g., discharged and background hydrocarbon) and adaptive management strategies. Status: Progress code: completed Point of contact: Responsible party: Individual name: R. Dean Grubbs Organisation name: Florida State University / Coastal and Marine Laboratory Position name: Associate Director of Research Contact info: Contact: Phone: Telephone: Voice: 8506972067 Facsimile: Address: Address: Delivery point: 3012 Westcott North City: Tallahassee Administrative area: Florida Postal code: 32306 Country: USA Electronic mail address: dgrubbs@bio.fsu.edu Role: Role code: pointOfContact Descriptive keywords: Keywords: Keyword: Benthic Ecology Keyword: Physiology Keyword: Toxicology Keyword: Taxonomy Keyword: Deep Water Ecology Keyword: Community Ecology Type: Keyword type code: theme Descriptive keywords: Keywords: Keyword: Gulf of Mexico Type: Keyword type code: place Language: eng; USA Topic category: Topic category code: biota Topic category: Topic category code: oceans Extent: Extent: Geographic element: Geographic bounding box: West bound longitude: -89.02708 East bound longitude: -85.78387 South bound latitude: 28.64536 North bound latitude: 29.55361 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gml:LineStringSegment: gml:posList: 29.3047 -87.77714 29.30022 -87.7784 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.84727 -88.88785 28.84706 -88.89398 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.81462 -88.83337 28.81355 -88.8397 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.93694 -89.0257 28.93697 -89.02708 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.64536 -88.61938 28.6481 -88.6242 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.74501 -88.5703 28.74508 -88.57624 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.90752 -88.96361 28.90854 -88.96922 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.97486 -87.87211 28.935 -87.56617 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.71688 -88.10737 28.72021 -88.11363 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.92827 -88.07384 28.92895 -88.07979 gml:curveMember: gml:Curve: gml:segments: gml:LineStringSegment: gml:posList: 28.9751 -87.8676 28.97486 -87.87211 Temporal element: Temporal extent: Extent: Time period: Description: ground condition Begin date: 2013-10-08 End date: 2013-10-15 Supplemental Information: File October 2013 cruise metadata for Data Team: vessel name; event_id, event date (DD-MMM-YY); set (set code); Deep-C station (Deep-C station code); latitude_start (decimal degrees); longitude_start (decimal degrees); latitude_finish (decimal degrees); longitude_finish (decimal degrees); TDR (Serial number for Lotek temperature/depth recorder deployed on line); Temp = temperature (degrees Celsius); Depth_min = minimum depth according to ship; later verified with TDR (meters); Depth_max = maximum water depth (meters) according to ship; later verified with TDR; Actual depth (m) = actual longline depth (meters); Time_in = (hhmm); Time_set (hhmm); Time_haul (hhmm); Time_out (hhmm); Gear_Effort (longline) = sizes and numbers of hooks used per longline set; Gear_Effort (trap) = number and size of traps used per set; Bait = bait type used; SeaState (feet) = estimated wave height; Wind speed (knots) = estimated wind speed; Set comments = additional notes/measurements pertaining to each set; Sediment sample = whether or not a sediment was collected at the site of the set (true or false=yes or no). File October 2013 Sample Data for Data Team.xlsx: event date (DD-MMM-YY); event_id (event identification code); Set (set code); Deep-C station = Deep-C station code, ID_Data_sample = specimen code (used to relate each sample back to a unique specimen identification code); ID_species = species name; sex (male/female); BW Weight (kg) = body weight; liver weight (g) = wet weight of liver; SL (cm) = teleost standard length or shark pre-caudal length; DW (cm) = batoid disk width; CW (cm) = crustaceans carapace width, CL (cm) = crustacean carapace length; FL (cm) = teleosts/sharks fork length or batoids disk length; TL (cm) = teleosts/batoids total length or sharks stretched total length: Mature (Y/N) = yes or no if mature; Maturity State (MAT/JUV/NEO/PUP/YOY) = mature (MAT), juvenile (JUV), neonate (NEO), pup (PUP), young of year (YOY); Hook/Trap Size, columns W through AH indicate if samples were taken for analysis; Tag # = external tag identification number; Hook/Trap Size = type of trap or hook size each specimen was collected with; Condition (Condition if released) = E=excellent: struggle during work-up, strong directional swimming upon release, G=good: little struggle, strong swimming upon release, mild disorientation possible, F=fair: relatively weak and disoriented swimming upon release, P=poor: some movement indicating life (e.g. nictitating membranes, gills) but very weak to no active swimming upon release, DOA=dead: no movements or life signs; SI = Biopsy for stable isotope analyses (# of samples); GN = Genetics samples (# of samples); RP = Reproductive tract (Y if collected); WM = White muscle for purposes other than stable isotopes – e.g. mercury analyses (# of samples); BD = Blood (# of vials); BI = Bile (Y if collected); ST = Stomach (Y if collected); AG = Aging structure (S=spines, R=rays, O=otoliths, V=vertebrae); Other = Any additional tissues collected (e.g. radiocarbon); SP = Specimen; whole specimen retained after sampling (Y/N); Vou = Voucher; specimen is a voucher retained for museum curation (Y/N); Specimen Comments = any additional specimen comment; CO=clasper outside (measurement, mm); CI=clasper inside (measurement, mm); G=gill; H=heart; OG=oviducal gland; MOD=maximum ovum diameter; UW-uterine width (mm); FB=football ova; YFS=yellow flaccid sacs; SRB=small round bodies; VDPC=vas deferens partially coiled; LAB=lost at boat; VDMC=vas deferens mostly coiled. Files 1281 to 1317 – each file reports data from a TDR (temperature depth recorder) that was deployed with an individual set: Rec# (record #), Date (MM/DD/YYYY), Time (HH:MM:SS), Pressure (dBars), IntTemp [C] =temperature (degrees Celsius). Files are named using Deep-C set numbers and site; associated data (e.g., latitude/longitude) for each set number can be found in “October 2013 Sample Data for Data Team.xlsx” and “October 2013 cruise metadata for Data Team”.|||||
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Distribution info: Distribution: Distributor: Distributor: Distributor contact: Responsible party: Organisation name: Gulf of Mexico Research Initiative Information and Data Cooperative (GRIIDC) Contact info: Contact: Phone: Telephone: Voice: 3618253604 Address: Address: Delivery point: 6300 Ocean Drive City: Corpus Christi Administrative area: TX Postal code: 78412 Country: USA Electronic mail address: griidc@gomri.org Online Resource: Online Resource: Linkage: URL: https://data.gulfresearchinitiative.org Role: Role code: distributor Distributor format: Format: Name: csv, xlsx Version: inapplicable File decompression technique: zip Distributor transfer options: Digital transfer options: Transfer size: 0.6617 Online: Online Resource: Linkage: URL: https://data.gulfresearchinitiative.org/data/R1.x138.079:0050 Protocol: https Name: Data Landing Page Description: GRIIDC dataset landing page Function: Online function code: information
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Metadata maintenance: Maintenance information: Maintenance and update frequency: unknown Maintenance note: This ISO metadata record was automatically generated from information provided to GRIIDC for dataset: R1.x138.079:0050 on 2020-02-19T00:33:05-06:00
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